SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000001086 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000001086
Domain Number 1 Region: 1086-1225
Classification Level Classification E-value
Superfamily PRC-barrel domain 5.26e-61
Family RIKEN cDNA 2310057j16 protein (KIAA1543) 0.00000176
Further Details:      
 
Domain Number 2 Region: 243-333
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 0.000000000111
Family Calponin-homology domain, CH-domain 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000001086   Gene: ENSGMOG00000001030   Transcript: ENSGMOT00000001124
Sequence length 1232
Comment pep:novel genescaffold:gadMor1:GeneScaffold_1671:427293:478113:-1 gene:ENSGMOG00000001030 transcript:ENSGMOT00000001124 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGEVQDIKDVKKIFIAPAIKSFDHYDFARAKIGCSLKWLVTKAYGTDGVPADLRDPFYTD
QYDQEHLKPPVVSLLLSADLYRRAGSHILKSDPAVGPLLGHDAVIQALAQRGLYVTDQER
LVTERDLHRRPLQMSGHLAMIDALMMAVAMETVSTEKVLACVRQYYPCNADLETPYDTED
AVTTWINKVTEYLKDIITQDQKKKEAQSPEPAGSPRSPTKWYMKLVPTRYRKDQNPSQQR
PWIPPVDNLLKDTTDGSALAALLHFYCPALLGLEDVSLKENMTLADSLYNLQLIRDFCRD
HLDGCCHFTLEDMLYASSTIKSNYLAFMAELFTSFEVDKPSFVKPRILDGEGTGLTPVTP
SSLLKNIPAVPISKATKRSFMDRSPSPERPRCFLPLRPQPRNTCFSGEIRRSTSMSFVDG
NVGTWPKEKRSGPYGVSFDIPFDKNDPAPASETPPRGMVRSASTDDGAGFKVHHMPRGMK
RNLSFQPVHGQNLGIEEEGCPESLAAPEAEVRPTTGRAYPNGHGNAAGGPSMEDALRMIS
PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTEVDLTEYTRSIDKLNHSLGFLQTEMQRL
AQQQEVIMAMREQKHQQSWLIPAPHANPAGQNPGRVGGAGTRSSGPSSPVDSPRVAHRSP
TSIRRKSASFHSRSPRTPRPSELKLAPYNRVLTAPQSVDSIPRLRRFSPCQPLAHSFVYM
GENPARANPETDPQDGDGNEEDPLLSLESEGVLSHPVLESFTVTPTESPPQLGLAKGSLV
EVPLLKRQREALEERDDGGAGLDADQTACRGFFFKEESKGEDNMAQKRAALLGGFKVKAE
EERLRKEEDKARKEFIKQEHLRRKQLKLMEDMDQVIKPRPAWDQRRSRPKSIHRESHDSP
RTPVRAAVSSLSLASLSLGDADSSQPDKRGPSSPKADGFLSPSRSNSRNGEKDWENASTT
SSVTSFTEYTGPKLYKEPSSKSNKHIIQNALAHCCLAGKVNEGQKNKILEQMEKCEANSF
LVLFRDAGCQFRSLYTYCPETDDITKLTGIGPKSINRKMIEGLFKYNSDKKQFSQIPAKT
MSASVDALTIHGHLWQTKKPPTPKKVVPPAKS
Download sequence
Identical sequences ENSGMOP00000001086 ENSGMOP00000001086

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]