SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000002326 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000002326
Domain Number 1 Region: 230-517
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 3e-89
Family Complement components 0.0000177
Further Details:      
 
Domain Number 2 Region: 58-178
Classification Level Classification E-value
Superfamily E set domains 8.68e-31
Family SVA-like 0.046
Further Details:      
 
Domain Number 3 Region: 597-708
Classification Level Classification E-value
Superfamily Alpha-macroglobulin receptor domain 1.22e-25
Family Alpha-macroglobulin receptor domain 0.00021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000002326   Gene: ENSGMOG00000002163   Transcript: ENSGMOT00000002403
Sequence length 709
Comment pep:novel genescaffold:gadMor1:GeneScaffold_1110:2244:38569:-1 gene:ENSGMOG00000002163 transcript:ENSGMOT00000002403 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
IETVRTFFPETWLWDIVEVGKSGLEEVHVTVPDTITTWETEAFCLSEQGFGLASPKELVV
FQPFFLDLSLPYSIIRGENLELKATVFNYQSSCIMVSMSPLISSDYTLTPLAGAQQASCL
CAKGRRTHSWKLTPTALGPVNVTMIAEAVSSHTSCDNEIVNVPERGRIDVVTRSLIVKAE
GTEQTKTHNILLCPKGESLQEKVELSLPEDMIQGSARASVSVLGDILGRALKNLDGLLSM
PYGCGEQNMALLAPNIYILEYLTNTQQITSKIKARATNFLTSGYQRQLNYKHSDGAYSTF
GTGSGNTWLTAFVLRSFVKAKSFIYIDPTILADAKSWLESKQQDNGCFQKLGSLFNNRMK
GGVSDEVTLSAYVTAALLETNMSVSDPQINKSMSCLRQSLGDKSNTYATSLLAYVFTLAG
DMEARTLLLEHLDKVATQEGGNLYWSQRSEKSMSLSVEISSYVLLATLSATPTTADLGYA
SRIVRWLTSQQNSYGGFSSTQDTVVALQALALYSTLVFSPEGSSTVDVQLPSGQMTFEVN
QDNKLLYQERSMKDVTGKYSVVVKGTACASMQLSLHYNIPTPRDESSFRIKVTPDSECST
NQLRPKVTLRLESKYVGKEDSTNMVMVDIKLLSGFVPEPESLRKLKSALLMDRVEHNDDF
FAVDVPINHFLDILQDIEVENLKPAVVKIYDYYQQSDQAETEYNDPCNK
Download sequence
Identical sequences ENSGMOP00000002326 ENSGMOP00000002326

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]