SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000002428 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000002428
Domain Number 1 Region: 387-622
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 4.73e-29
Family Calponin-homology domain, CH-domain 0.00022
Further Details:      
 
Domain Number 2 Region: 87-242,384-470
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 6.96e-22
Family HI0933 N-terminal domain-like 0.069
Further Details:      
 
Domain Number 3 Region: 733-762
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000285
Family LIM domain 0.026
Further Details:      
 
Domain Number 4 Region: 763-794
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000402
Family LIM domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000002428   Gene: ENSGMOG00000002254   Transcript: ENSGMOT00000002508
Sequence length 936
Comment pep:novel genescaffold:gadMor1:GeneScaffold_3298:809648:828500:-1 gene:ENSGMOG00000002254 transcript:ENSGMOT00000002508 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGDMTADPKDLVMKLFENFAQAPACKCTLQAFNVMCAQLGLDPLEHITFYSSLKDKMTTW
KAKALWSKLDKRFAHKEYKKGQACVGTKCLVIGGGPCGLRTAIELALMGAKVVVIEKRDS
FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIQQLQLMLLKIALIVGVEFHIN
VEFVKLLEPSEDQENEALGWRAGILPADHPVANFEFDVVVGADGRRNTLEGFSRTEFRGK
LAIAITANFTNRNTTAEAKVEEISGLAFIFNQKFFLDLKEETGIDLENIVYYKDKTHYFV
MTAKKQSLLDKGVVIHDYVDTQSLLCSNNVNQEALLCYAREAADFGTNYQLPTLDYATNH
YGQPDVAMFDFTSMHASEHAAVVRERHGRHLLVALVGDSLLEPFWPMGTGCARGFLAALD
TAWMVRGWAQERPVLELLAERESIYRLLPQTTPENLAKNFDLYTIDPGSRYPNKNFSSVK
AKQVRHLYVTRELNACPLQRSATIRRPVNIDRRESEIRPGRLLTWCQKQTEGYRNVSVTD
LTSSWHSGLALCALIHRFNSQLVDFSSLTEEDAAANLQLAFDVGQREFGVAPFTSGQELS
AAPDVDKTQMILYLSKIYELFRGTPLPQTGLRVADENSVEYPSNDPRHMTNGINVSQPRK
RVPREERKSAESVYKRRRKGGSSSHLDEATHLQASRDSSALLEETAPRENNRVRSMATQL
QAMFEGTAASTVRRDKCHSCGKRVYVVERISTEGLYFHRECFRCKTCNSPLSQGAHVYDS
EQGKLYCKAHFVQHKNGTHLRRNINGRTVLATAGTLLPTSCSTSPERPPHCPTLRRAPTG
TLTSLLRKGLSWPMSLTRAVCGAPRQLSGWLQRRTRALGVHVRANGRDYAFLYELLSVGL
PLLLVLQGVLQQMYVEAAPAGPCLQPARRWLEENAG
Download sequence
Identical sequences ENSGMOP00000002428 ENSGMOP00000002428

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]