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Domain assignment for ENSGMOP00000003740 from Gadus morhua 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSGMOP00000003740
Domain Number 1 Region: 309-508
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 2.09e-27
Family Calponin-homology domain, CH-domain 0.00025
Further Details:      
 
Domain Number 2 Region: 548-578
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000506
Family LIM domain 0.048
Further Details:      
 
Weak hits

Sequence:  ENSGMOP00000003740
Domain Number - Region: 579-606
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000768
Family LIM domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000003740   Gene: ENSGMOG00000003524   Transcript: ENSGMOT00000003854
Sequence length 897
Comment pep:novel genescaffold:gadMor1:GeneScaffold_4583:10737:35537:1 gene:ENSGMOG00000003524 transcript:ENSGMOT00000003854 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
WRTEPTDPSHALFDLFVTAESCRDVQQHFSALCEQLQVDPKDYRVFYSKLKERLNYWKAK
DLWKEIDKRASHKDYQQRKACAENKLQLILLKVALVLGVEVLTAVEFQGLEEPSGDKGWT
AKLHPNPHPTLVFEFDVFISAGGGSFLPDGFKQKELRATLAIGITANFTNRHTAAEAQVA
EISGVARIYNQKFFHDLLTQTGIDLENIVYYKDDTHYFVMTAKKESLLKKGVIKQDYSDA
EQLLARENVDHDALWRYAYEAANFSTNRQLPELEFATNPAGRPDVAMFDFTCMHRAEHAS
LVRERRGKKLLMGLVGDSLVEPFWPLGTGIARGFFAAFDTAWMVRSWGLGIPCLQVLAXX
ESIYQLLSQTDPGNTKNNYTSYSIRPSTRYRHVNLSAIQVHQSAGGVEDLLRWCQKNTAG
YAGVEVKDFTLSWTSGLALCALIHHFRPQLIDMSSLNESNAVHNHQLAMDLLERELSISP
VMAASAMASSGLIDKLSMVLYLTQVHDVLTKNKKADVLDLPKPLTLPRLLSAVYFLSKLK
HNSLQRPKSSEDCYSCGQRLYLLARVNAMGKFFHRDCFTCHKCGHPLRLGGYTFHQTTGF
YCELHSEHLGPANGSEDSSDEQHQTIPGPIGNPQSCKAPSWSPPAVPLPDSRPKQSLRKL
QLSEEEKCQLVNLQSFSADSDSETPGGSSSCSSSSAATAGGPSPPKPAGRARGQEEEXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLERRAKMTELQRFRNAQSIQR
RLEEIEVTFKELEEKGVVLERALRGEPGSGGSPEMIEQWIQLVHEKNAVDSEESDLMVAX
XXXXXXXXQGMLELELRKYKELSEKTAEQQAEEERILQQRMEVVDMRDSLVAFLDEK
Download sequence
Identical sequences ENSGMOP00000003740 ENSGMOP00000003740

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