SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000004711 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000004711
Domain Number 1 Region: 961-1174
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.37e-101
Family Thrombospondin C-terminal domain 0.0000000064
Further Details:      
 
Domain Number 2 Region: 30-231
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.54e-38
Family Laminin G-like module 0.0000279
Further Details:      
 
Domain Number 3 Region: 838-959
Classification Level Classification E-value
Superfamily TSP type-3 repeat 7.45e-37
Family TSP type-3 repeat 0.000000571
Further Details:      
 
Domain Number 4 Region: 769-840
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.00000000000000131
Family TSP type-3 repeat 0.00031
Further Details:      
 
Domain Number 5 Region: 497-548
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000000000209
Family TSP-1 type 1 repeat 0.00011
Further Details:      
 
Domain Number 6 Region: 440-495
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000000000419
Family TSP-1 type 1 repeat 0.00013
Further Details:      
 
Domain Number 7 Region: 697-781
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.000000000000196
Family TSP type-3 repeat 0.00013
Further Details:      
 
Domain Number 8 Region: 323-381
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000046
Family VWC domain 0.0028
Further Details:      
 
Domain Number 9 Region: 386-429
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000562
Family TSP-1 type 1 repeat 0.001
Further Details:      
 
Weak hits

Sequence:  ENSGMOP00000004711
Domain Number - Region: 553-606
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00204
Family EGF-type module 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000004711   Gene: ENSGMOG00000004422   Transcript: ENSGMOT00000004851
Sequence length 1174
Comment pep:novel genescaffold:gadMor1:GeneScaffold_1260:8569:25038:1 gene:ENSGMOG00000004422 transcript:ENSGMOT00000004851 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MILRRSLYLLPFLCTFRHALLPAGEQEDETSFDLFEVSHITRKTLGAKQFRGQNSDLPAY
RFIRFDQLPSVDAPVLKQILRQTQNNEGFIFIASIRQDRASRGTLVGLEGPGGRRQFEVV
SNGRANTLDLVYWVDGAQKVASFEEVDLSDSQWKNITLHIHGENANLFIGCNLIDSFILD
EPFYEHLQSEGGRLFVAKGATRESHFRGLLQNVRFIFNTPVEDVLLTRDCEIIKEDEANT
VSESTEMLDAVSPSITTNFIGQKTDETGDMCERSCEELSTMFRELKGLRVVVSNLIDGLQ
KVTEENTLMKEALVRMKDTKEKNLCWQDGRLFEDKEDWIVDSCTKCTCQESKIVCHQITC
PPVACASPTFNDAECCPVCMSVDSEDGWSPWSEWTECTVTCGTGTQQRGRSCDATSNPCS
GASIQTRKCSLGKCDSRVRQNGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDC
EGSGRETQRCEAQPCPIDGGWGPWSPWATCSATCGGGIKSRTRVCNSPHPQFGGRGCVGE
DTDSDICNKMGCPIDGCLSNPCFGGVDCNSSPDGSWECGPCPSGFRGNGTQCEDINECDM
VSDVCYKVNGVQRCVNTDPGFHCLPCPKRYKGTQPFGMGMEAAKKHKQVCEPENPCKDKT
HNCHKYAECIYLSHFSDPMYKCECRTGYAGDGFLCGEDSDLDGWPNQNLVCGANATYHCK
KDNCPSLPNSGQEDFDKDGQGDACDKDDDNDGIVDERDNCPLLYNPRQFDFDKDDVGDRC
DNCPYEHNPAQIDTDHNGEGDACAVDIDGDEILNESDNCPYVYNTDQKDTDMDGVGDQCD
NCPMLHNPDQTDVDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANANQADQDKDGKGDAC
DYDDDNDGVPDEKDNCRLTPNEDQVDADGDGRGDACKDDFDNDSIPDIFDVCPENNAISV
TDFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFSAVDFSGTMYV
NTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEEKPSKAFGISGVSLKVVNSTTGTGE
NLRNALWHTGNTQGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMAD
SGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECR
Download sequence
Identical sequences ENSGMOP00000004711 ENSGMOP00000004711

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]