SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000005203 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000005203
Domain Number 1 Region: 2-106
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 4.58e-34
Family Calponin-homology domain, CH-domain 0.0000455
Further Details:      
 
Domain Number 2 Region: 176-204
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000171
Family LIM domain 0.022
Further Details:      
 
Domain Number 3 Region: 205-234
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000475
Family LIM domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000005203   Gene: ENSGMOG00000004908   Transcript: ENSGMOT00000005359
Sequence length 376
Comment pep:novel genescaffold:gadMor1:GeneScaffold_1876:1055084:1062623:-1 gene:ENSGMOG00000004908 transcript:ENSGMOT00000005359 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSAIKALEKWCKMQCDGYQDVAINNMTTSFKNGMAFCALIHKYRPDLIDYESLKKEDVFQ
NNHLAFRVAEEKLGIPALLDAEDMVALRVPDRLSILTYVSQYYNYFNGRSAIGGVKRPAE
GSKENLSKKNLPMVSKTFVSNGKGFPSPHVTESSPGTARAFSATAEGNTGKSGTLNSKCV
ACQSHVHLVQRHFVDGKLYHRSCFRCSDCSGTLRPGAYRVGSSPDTFVCKSHCEPANKTA
DHSTPLSLSAQKTQAARQRFFQTAGPAVAEPPWAHMKPPGPADVHSHSPGAKEKSGNQPA
QENCNNNNVRHFTVRSAKRRFGGDPSPDGGASFTQETSTQGKEGTQRGQPTAVEASGPKA
VQMDENRLTTVGNTTT
Download sequence
Identical sequences ENSGMOP00000005203 ENSGMOP00000005203

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]