SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000005796 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000005796
Domain Number 1 Region: 3-107
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 5.89e-34
Family Calponin-homology domain, CH-domain 0.0000626
Further Details:      
 
Domain Number 2 Region: 159-187
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000923
Family LIM domain 0.02
Further Details:      
 
Domain Number 3 Region: 188-218
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000219
Family LIM domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000005796   Gene: ENSGMOG00000005436   Transcript: ENSGMOT00000005965
Sequence length 875
Comment pep:novel genescaffold:gadMor1:GeneScaffold_3945:13712:38353:-1 gene:ENSGMOG00000005436 transcript:ENSGMOT00000005965 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGSLKALQEWCRLQCEEYSDVDVKNMSSSFRDGLAFCAIIHRFRPDLIDFSTLSKENVYE
NNRLAFEVAEAQLGIPALLDPEDMVSMKVPDRLSIITYVSQYYNFFTNKSHGGKPNPPCM
KRPAGSGQGEPAQKRLMAPQEDTAPGKNDDATGQWSTLSSACTACLKHVHLVQRFMVDGK
LYHRNCFRCIECSSTLLPGSYKMGKESGSLICTHHFNRPALANQNGRPDLSKRPAEARSA
RIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXQSIDSPKPKDPPWLALVQSESKKKPAPPPPPAGLATPPRAGSVTSLKVA
GSRPGLPPKPAPANPFDDDEDEEGGVAEEEEEAVAVPTVAAAVHPWYSXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFKENPFNRKASPSDGATKTRPP
RGPRPARPPAPGHGFPLIKRKVQSDQYIPVEDIHDEMRGLERQLDQLEQRGVELETKLRD
SPSDEEEERLLVEWFTLIHDKHLLVRREAELVYTSKQQNLEERQADVEYELRCLLNKPEK
DWSEADRTREQELMADLVTVIEQRNQIINNMDQDRQRDEEEDKLMADMLKKKDFHKEPDG
EKKKKKAAKFKPMKVLKRLSHKGDPSQTPSPRKDK
Download sequence
Identical sequences ENSGMOP00000005796 ENSGMOP00000005796

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]