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  Home > Genomes > Gadus morhua 69_1 > ENSGMOP00000006664

Domain assignment for ENSGMOP00000006664 from Gadus morhua 69_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGMOP00000006664
Domain Number 1 Region: 4-265
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 9.05e-80
Family Calponin-homology domain, CH-domain 0.0000976
Further Details:      
 
Domain Number 2 Region: 1326-1437
Classification Level Classification E-value
Superfamily E set domains 2.87e-36
Family Filamin repeat (rod domain) 0.0000175
Further Details:      
 
Domain Number 3 Region: 1419-1534
Classification Level Classification E-value
Superfamily E set domains 2.4e-33
Family Filamin repeat (rod domain) 0.0000207
Further Details:      
 
Domain Number 4 Region: 1526-1633
Classification Level Classification E-value
Superfamily E set domains 4.6e-33
Family Filamin repeat (rod domain) 0.00000284
Further Details:      
 
Domain Number 5 Region: 1623-1728
Classification Level Classification E-value
Superfamily E set domains 5.94e-30
Family Filamin repeat (rod domain) 0.0000487
Further Details:      
 
Domain Number 6 Region: 1843-1936
Classification Level Classification E-value
Superfamily E set domains 6.07e-30
Family Filamin repeat (rod domain) 0.00000756
Further Details:      
 
Domain Number 7 Region: 2031-2126
Classification Level Classification E-value
Superfamily E set domains 1.04e-28
Family Filamin repeat (rod domain) 0.0000258
Further Details:      
 
Domain Number 8 Region: 1076-1169
Classification Level Classification E-value
Superfamily E set domains 5.74e-28
Family Filamin repeat (rod domain) 0.0000243
Further Details:      
 
Domain Number 9 Region: 1237-1348
Classification Level Classification E-value
Superfamily E set domains 3.44e-27
Family Filamin repeat (rod domain) 0.0000314
Further Details:      
 
Domain Number 10 Region: 670-778
Classification Level Classification E-value
Superfamily E set domains 6.01e-27
Family Filamin repeat (rod domain) 0.00083
Further Details:      
 
Domain Number 11 Region: 563-665
Classification Level Classification E-value
Superfamily E set domains 1e-26
Family Filamin repeat (rod domain) 0.00011
Further Details:      
 
Domain Number 12 Region: 466-570
Classification Level Classification E-value
Superfamily E set domains 5.47e-26
Family Filamin repeat (rod domain) 0.0014
Further Details:      
 
Domain Number 13 Region: 2306-2396
Classification Level Classification E-value
Superfamily E set domains 7.34e-26
Family Filamin repeat (rod domain) 0.00000904
Further Details:      
 
Domain Number 14 Region: 366-477
Classification Level Classification E-value
Superfamily E set domains 1.28e-25
Family Filamin repeat (rod domain) 0.0012
Further Details:      
 
Domain Number 15 Region: 755-868
Classification Level Classification E-value
Superfamily E set domains 2.3e-24
Family Filamin repeat (rod domain) 0.0007
Further Details:      
 
Domain Number 16 Region: 2629-2719
Classification Level Classification E-value
Superfamily E set domains 4.47e-24
Family Filamin repeat (rod domain) 0.00000734
Further Details:      
 
Domain Number 17 Region: 1144-1245
Classification Level Classification E-value
Superfamily E set domains 2.66e-23
Family Filamin repeat (rod domain) 0.0000991
Further Details:      
 
Domain Number 18 Region: 2497-2588
Classification Level Classification E-value
Superfamily E set domains 1.13e-22
Family Filamin repeat (rod domain) 0.0000126
Further Details:      
 
Domain Number 19 Region: 277-374
Classification Level Classification E-value
Superfamily E set domains 2e-22
Family Filamin repeat (rod domain) 0.0012
Further Details:      
 
Domain Number 20 Region: 946-1057
Classification Level Classification E-value
Superfamily E set domains 2.81e-22
Family Filamin repeat (rod domain) 0.0009
Further Details:      
 
Domain Number 21 Region: 2407-2495
Classification Level Classification E-value
Superfamily E set domains 4.2e-22
Family Filamin repeat (rod domain) 0.0000166
Further Details:      
 
Domain Number 22 Region: 2239-2320
Classification Level Classification E-value
Superfamily E set domains 1.33e-20
Family Filamin repeat (rod domain) 0.00014
Further Details:      
 
Domain Number 23 Region: 1950-2045
Classification Level Classification E-value
Superfamily E set domains 1.33e-17
Family Filamin repeat (rod domain) 0.0000719
Further Details:      
 
Domain Number 24 Region: 1763-1844
Classification Level Classification E-value
Superfamily E set domains 6.67e-16
Family Filamin repeat (rod domain) 0.0001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000006664   Gene: ENSGMOG00000006220   Transcript: ENSGMOT00000006857
Sequence length 2720
Comment pep:novel genescaffold:gadMor1:GeneScaffold_133:13529:100455:1 gene:ENSGMOG00000006220 transcript:ENSGMOT00000006857 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MLSNSSSLPQYYQGTTNNGEEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKGLSKR
INDLQKDLSDGLKLIGLLETLSQKKMYRKYHLRPNFRQMKLENVSVALEFLEREHIRLVS
IDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDEEDARKLTPKQRLLGWIQNKVPQM
PINNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGVPQVIA
PEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRAKTLHPKMAKAYGPGIEPRGNIVLKPA
EFLVETVEAGLGEVLVYVEDPEGHTEEARVIPNNDKKRSYSVVYLPKVEGLHKLKVLFAG
QDIDRSPFNVNVSKALGDPNKVQARGPGLEPQGNVANKPTYFDIYTAGAGAGDVGVVIVD
ANGRRDTVEIVLENKGDSVFRCTYGPVLEGPHVVHVTFAGQQVPRSPFTVHISEACNPNV
CRASGRGLQPKGVRVKEVADFKVYTRGGGSGELKVTIKGPKGQEEPVAAQAGDGVFDCDY
YPVVVGKYLITITWGGHSIPRSPMEVLVSEEAGPQKVRAWGPGLETGLVGKSADFVVEAI
GTEVGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAH
ILPAANDVFPEQVQCYGPGLEPTGCIVNKAADFTIDTRGAGRGELRLYAQDAEGFPIDIQ
ITDNGDSTFLCVYIPSKPIKHTLIITWGEVNVPSSPFRVMIGEGSHPENVKVYGPGVERA
GLKANEPTYFTVDCSDAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYPPGP
GKYTIMVLFADQEIPVSPFRIKVDPSHDAAKVRAEGPGLSKTXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVVITVSHGGDPIPKSPFNI
SVAPPLDLNKIKVHGLNNKVDVGLDQEFSVSTLGAGGQGKLDVKITSPSRRPIPCKLESG
SANEVTTVKYIPPEEGPYRVDVTYDGNPIPGSPFTVEGVMPPDPSKXXXXXXXXXGGVVG
KPAPFAIDTKGAGTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEAGDYAINILFADQ
HIPGSPFKSAVRPAFDPSKVTASGPGLERAKEDGGRFTVDCSEAGEAELSIEIASEAGAE
VCVTENGDGTYSITYTPRCHGAYTITIKYGGQAVPRFPARLQVEPALDTSGVTVYGPGVE
PRGVLREVTTHFVVDARALCTSGSSRIKALITNPSGAVTDAYVTDKGDGTYRVEYTAYED
GLHLLEVLYEEVGVPQSPFRVMVMEGCDPSRVRAYGPGLEEGLVNKPNRFTVETRGAGTG
GLGLAIEGPSEAKMSCKDNKDGSCSVEYIPFTPGEYDVNITFGGLPIPGSPFRVPVRELV
DPGKVRCSGPGLGSGVRAHVLQTFTVDCSKAGLAPLEVQLYGPTGVTEPVSVTDNGDGTH
TVTYTPAKDGPYTVCVKYADQEVPRSPYKIKTLPAHDASKVRASGPGLNSSGVPASLPVE
FTIDARDAGEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYVPDMAGRYTITIKYGGDEI
PYSPYRIHALPTGDASKCLVTGSGLGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAE
LDVDVVENADGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVASDTAPIIEEPCDMLQ
IQQPYAPYVGSAPHWATEEPVTAGDGMEPILRPFNLVIPFTVQQGEITXXXXXPSGRTAQ
PHITDNKDGTVTVKYAPTEKGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAFGPGLSH
GTVNRPATFTIVTKDAGEGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPSAPGDYNIIVK
FDDKHIPGSPFTARIXXXXXXXDETMRMSQLNVGTATDVSLKITETDLSSLMATIRAPSG
HEEPCLLKRLPNRHIGISFTPKEVGEHVVSVKKSGKHVTNSPFKIMVGQSEIGDASKVKV
HGQGLVEGHTFEVAEFIVDTRNAGTGGLGLSIEGPSKVDINCDDVEDGTCKVTYCPTEPG
NYIINIKFADQHVPGSPFTVKVFGEGRMKESITRKRQASSIATVGSTCDLNLKIPGNWFQ
MVSAQERLTHTFTRSSHTYTRTERTEISKTRGGETKREVRVEKSTQVAADPFGGTDPFGD
FLGPEGRTGFSPSPRPGEWGGREMTAQVTSPGGQIKEAEIVRGDDSTYSVRFVPTEMGAH
TVNVKYRGQHVPGSPFQFTVGPLGEGGSHKVRASGTGLDRGVAGIPAEFSIWTREAGAGG
LSIAVEGPSKAEITFEDRKDGSCGVAYVVQEPGDYEVSIKFNDENIPDSPFVVPVATLAD
GARALTVTSLQELGLKVGQEASFAVQLNGARGLVDAKVHTPSGAIEECYVTELDSDQYAI
RFVPRENGVHSIDVRFNGSHVPGSPFNVRVGDPGQAGDPGMVSAFGPGLEGGSTGAASEF
FVSTCNAGSGALSLTIDGPSKVKMDCVEGPEGYRVTYTPMAPGSYLISIRYGGPRHIVGS
PFKAKVSGACLSGGHSLHETSSVLVETVTKSSQAAIVGGFPSLPKFSSDASQAVSRGAGL
SKAFVGQKNMFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHMGNRMYNVTYTVKEQGDYI
LIVKWGDDNVPGSPFYVTVP
Download sequence
Identical sequences ENSGMOP00000006664 ENSGMOP00000006664

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.