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  Home > Genomes > Gadus morhua 69_1 > ENSGMOP00000007001

Domain assignment for ENSGMOP00000007001 from Gadus morhua 69_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGMOP00000007001
Domain Number 1 Region: 3972-4207
Classification Level Classification E-value
Superfamily Plakin repeat 1.31e-85
Family Plakin repeat 0.0000000385
Further Details:      
 
Domain Number 2 Region: 166-394
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 3.48e-84
Family Calponin-homology domain, CH-domain 0.00000127
Further Details:      
 
Domain Number 3 Region: 3067-3307
Classification Level Classification E-value
Superfamily Plakin repeat 3.14e-80
Family Plakin repeat 0.000000292
Further Details:      
 
Domain Number 4 Region: 3398-3637
Classification Level Classification E-value
Superfamily Plakin repeat 3.4e-77
Family Plakin repeat 0.000000267
Further Details:      
 
Domain Number 5 Region: 2741-2980
Classification Level Classification E-value
Superfamily Plakin repeat 3.79e-75
Family Plakin repeat 0.000000336
Further Details:      
 
Domain Number 6 Region: 3736-3957
Classification Level Classification E-value
Superfamily Plakin repeat 7.15e-69
Family Plakin repeat 0.000000634
Further Details:      
 
Domain Number 7 Region: 4283-4324,4365-4559
Classification Level Classification E-value
Superfamily Plakin repeat 1.22e-67
Family Plakin repeat 0.000000351
Further Details:      
 
Domain Number 8 Region: 408-522
Classification Level Classification E-value
Superfamily Spectrin repeat 1.01e-23
Family Spectrin repeat 0.004
Further Details:      
 
Domain Number 9 Region: 1297-1467
Classification Level Classification E-value
Superfamily Spectrin repeat 6.88e-16
Family Spectrin repeat 0.011
Further Details:      
 
Domain Number 10 Region: 714-843
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000156
Family Spectrin repeat 0.0053
Further Details:      
 
Domain Number 11 Region: 801-928
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000216
Family Spectrin repeat 0.012
Further Details:      
 
Domain Number 12 Region: 4230-4278
Classification Level Classification E-value
Superfamily Plakin repeat 0.000000000628
Family Plakin repeat 0.0079
Further Details:      
 
Domain Number 13 Region: 580-746
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000016
Family Spectrin repeat 0.0054
Further Details:      
 
Weak hits

Sequence:  ENSGMOP00000007001
Domain Number - Region: 1231-1334
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000677
Family Spectrin repeat 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000007001   Gene: ENSGMOG00000006545   Transcript: ENSGMOT00000007203
Sequence length 4626
Comment pep:novel genescaffold:gadMor1:GeneScaffold_293:1624746:1686877:1 gene:ENSGMOG00000006545 transcript:ENSGMOT00000007203 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MVAGMVMPLRDLRAIYELLFRDGVMVAKKDKRPQTKHPEIPGISNLQVMRAMLSLKSRGY
VKETYSWRHFYWYLSNEGIVYLRDYLRLPAEIVPASLQRVKRPAAMLPISRRGAQVQTVE
GPTSYVPKPGGRPGSESREGLAERQGYRHKMAEGEEXXXXXXXXXXXXXAQDERDRVQKK
TFTKWVNKHLMKSQRHVSDLYEDLRDGHNLISLLEVLSGEHLPREKGRMRFHKLQNVQIA
LDFLRLRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQQISDIQVNGQSEDMTAKEKLL
LWSKTMTENYQGMRCDNFTTSWRDGKLFNAVIHRHQPRLVDMGRVYRQTNLENLEQAFNV
AEKDLGVTRLLDPEDVDVAHPDEKSIITYVSSLYDAMPRIPEAQEGQLELRWQEYYELVT
LLLQWIQHHITIFGERKFPGSYEEIEILWRQFLKFKETELPAKELDKNRSNQIYQTFESA
VRAGQVKVPPGYHPIDVEKEWGRLHSACLDREKLLRIEFERLERLQRIVTKVQMESGVCE
EQLNQLDSQMQTDLRLLNSGKPARYTAEVERDLDKADGMIRLLFNDVQFLKDGRHLQSEQ
IYRRVYRLHERLVNLRTDHNLRQKTTLTTTMHQIAQVSQSSKGRPELDGVTLRYAQDLLA
WVEENQRRINESEWGSDLPTVESNLGSHRGLHQSVEDFRAKIERAKTDEGQLSPVSKGAY
RDYLGKLELQYAKLLNSSKSRLRNLESLNGFVSATTKELMWLNDKEEEEVNFDWSDRNSN
MTAKKDNYSGLMRELELREKKINDIQTTGDKLIREGHPGKKTVEAFTAALQTQWSWILQL
CCCIEAHQKENTSYYQFFADVKESQEQMRKMQENMKKKYSCDRATTATRLEDLLQDAAEE
KEQLNEVKTNVSSLNKRARTIIQLKPRNPTTAIKGKLPIQAVCDFKQAEITVHKGDECAL
LNNSAPFKWKILNRSGNEAVVPSVCFMVPPVNKDAMDSVASLDAGHQQMVTMWQQMHIDM
KGLLSWQYLMKDITVIRSWNITMFKSMKQDEYRLMIRNLQLHYQDFLRDSQDSQQFGPDD
RQQVEGEYNKTTQYFDNLLSSMEKGEQYESVCKSYTSQLKDLRVRIEDCETHTVNRIRRP
LGEEPLKECLLKTSEQKKEHNELDRIKKEVDTVSLKTQEVLSSPQQPASAPALRSELQVT
VQKMDHAHMLSSVYLEKLKTVDVVIRSSQGAEGVLKKYEDKLRDVQTVPNDVKEVETCRA
ELKKLHAAAESEQPAFESLETELKKASGASDRMSRVHSERDVELDHYHRHLSGLQDRWRA
VFTQMDLRHRELEQLGRQLGYYRESYAWLIQWIGDAKQRQEKIQAVSISDSKTLKEQLAQ
EKKLLEEIENNKDKVDECHNYAKAYIDTIKDYELQLVAYKAQVEPFTSPMKKNKMDSASD
NIIQEYVTLRTRYSELMTLTSQYIKFITDTQRRLEDEEKAAQKHKVEEQKKFAEIQAELA
KQKQLAESHAKAIAKAEQEALELKLKMQEEVSRRDIVAVDAQNQKQNIQQELHELKNLSE
QQIKNKSQQVDEALYSRTKIEEEIRIIRIQLETTVKQKSVAESELHQLRDKAEEAERLRK
AAQEEAEKLRIQVNEETHKKRAAEEELKLKSEAEKEAAKQKQRALEDLENLKMQAEEAVQ
QMKQAEIEKERQIKVAHQAAQKSAAAELQSKRMSYVEKTTKLEESLKQEHGTVLQLQQDA
ARLKKQQEDAESAREEAEKELEKWRQKANEALRLRLQAEEEAQKKTVTQEEAEKQKEEAE
REAKRRAKAEESALKQKEMAENELERQRKLAEGTAEQKLNAEQELIRLRADFDHAEQQRS
LLDNELYRLKNEVVAAQQQRKQLEDELAKVRSEMDLLIESKNKAEKESMSKTEKSKQLLE
NEAAKMKDLAEEAGKLRSIVEEAKRQRQVAEDEAARQRGEAERILKEKLAAINEATRSKT
EAEIALKEKEAENERLRRHAEDEAYQRKALEDQANQHKQDIELKIVQLKKSSEVEMERQK
AIVDDTLKQRRIVEEEIRILKVNFEKASSGKLDLELELNKLKNIAEETQQSRLRAEEEAE
KLRKLSLKKIAAAEAEAGRQRKIAQDEVERLKKRAEEARKQKEEADMEAEKQIVVAQQAA
QKCSAAEHQVQSVLEQQQEDNIGQQKLKAEYEKAKKLAKEAEAARKNAENEAALLRQQAE
EAERQKLLAEQEALVQQKAQEDAERLRKEAEFEAAKRGQAEAAALKQKERADAEMAKHKK
LAEQTLKQKFQVEQELTKVKLQLDETDKQKYVLDDELQRLKDEVGDAVKQKAQVEEELFK
VKVHMEELLKQKLRIEGENQRLIKKENENTQKFLADKAENMKKLSEEAARLSVEAQEAAH
LRQAAEDELSQQRALAEKMLKEKMQAIQEASTLKAEAEMLQRQKDQAEEQAQKLLKDKQL
MQQRLEEETEGYQKSLEAERRRKLEIIAEAEKLKLEVSQLSDGQSKAQEEAKKFKKQADS
IAARLHEIEIKNLEVQQFSSKESGDLRKAFADLENEKDKLKKEAEELQNKSKEISDAQQK
QIEHEKTMLQQSFLSEKEMLLKKEKLIEDEKKKLESQFEEEVKKAKALQDEQERQRQLME
AEKKKLQANMNAALNKQKEAEIEMLNKQKEMQELERQRLEQERVLGLENQNLRDKLEQLE
RDQKNKELEKQLKLMVVPTKSVQNGQGVDAVDSGKADPLSFDGIREKVPASRLHEVGLLT
KKEFDKLKKGKTNVQDLGQSEKLKGILKGKNSIAGLLSPTHQKMSIYQASKEKKITPGTA
MILLEAQAATGYLIDPIQNKKLSVNEAVKESLIGPELHNKMLLAERAVIGYKDPYTGSKI
SAFEAMKKGLIEHDHAVRILEAQLATGGIIDPINSHRVPKELAFKQGHFDAEMSKSLENA
SDDTKGYFDPSTQEPLTYSQLMERCATDPDTGLLLLPITDKAAQCSSIFTEEETKDVFSK
TQVSVPFGKFQGRTVTIWEIINSEYFTEDQKRDLLRQYKTGKITIEKIIKIVITVAEEKE
KKNEIAFDGLRAPVPATELLESKIIDKDLYNKLQTGKKTIEEVSDTKDVKTALKGTNCIA
GVMIESTQETMSFYQAMKKDIMWPAPALHMLEAQAGSGYVIDPVKNQKHTVDEAVKAGIV
GPELHEKLLSAERAVTGYKDPYSGQTVSLFEAMKKDLIPTDQGMRLLDAQLTTGGIIDPV
KSHHIPQEVACKRGFFDNETRQLLNKPTEENQHFFDPNTQEQVTYSQLFARCIVDKKTGL
PLLPLSDQAISSKEIQKYTESQTKEALTQATVEMNSGPYKGRKITIWEIINSEYLTEEQR
RDLIKQYRSGKITIEKIIRIVITVVDEKEAKKEQQVSFKGLRAPVTAESLFNSKIIDKET
FGLIQEGKTTPKEVSANPNVNKFLQGSDSIAGLYLETSQEKISIYQAMKRNLLRHETGLS
LLEAQAATGFITDPVKNQCLSVDEAVKSGLVGPELHEKLLSAEKAVTGYKDPFTGNKISL
FEAMEKDLVLKEHAMPFLEAQMVTGGIIEPVKSHRVPIDIACKMNIFSKDIVKTLSEQSD
DNKVFSDPETDGHVTYKQLREKCTKDPETGMYLLPLSKPQSPTPVIVEKTYLYTEEQTQS
DLANTKMEIPIEGLTGESMNLWDVMNSNLLPEKERQRLMDEYRSGNITKERMIIIIIEIM
EQREIIMNDGPMSCTTIRRRITIEELYNARIINVELYNLLKSGKREVRDVMEMTDVKQYL
YGTGCVAGVTTDTSAKLSIYQAMKRGFLKPEVALSLLEAQAATGFIVDPLKNETLTVDEA
VRKGVVGPEIHDKLLSAERAVTGYKDPYSGKIISLFQAMKKDLVLEDYALKMLEAQNSTG
GIIDPEFQFHLPADIALKRGYINKETNERLSDDVKGFVDPVTEEKLSYSQLLKRCKLVGG
LRLLSLGDKRLTFKGLRKQITLEELLRSQIIDEETATQLKEGLITVEEVSARLSRYLEGT
SCIAGVHVENTMDRLSIYQAMKKNMIRPGTAFELLEAQAATGYVIDPIKNLKLTVHESVR
MGIVGPEFKDKLLSAERAVTGYRDPYSGKTISLFQAMKKGLILKDHGIRLLEAQIATGGI
IDPEESHRLPVEVAYKRGLFDEEMNEILTDPSDDTKGFFDPNTEENLTYLGLMERCITDP
DTGLVLLLLKEKKREGKSSSKSSVRKRRVVIVDPESGREMTVYEAYKKGLIDHQTYLELS
EQECEWEEITMTSSDGTVKSIITDRRSGRQYDVDDALARGLIDKNSLDTYRSGNLSISEF
ADMLSGTMGGFRSRTSSFSSTTGSTSSSFAMSPLPTIKAPAVIWNDPSEETGPIAGILDT
DTLEKVSVTEAMHRNLVDNITGQRLLEAQACTGGIIDPTTGERLPVPEATEKGLVDKIMV
DRLSLAQKAYNGFEDPRTKERMSASQALKKGWLYYEAGQRFLEIQYLTGGLIEPDVEGRV
SLDDSIKKGSIDARTAQKLRDVSAYSKYITCPKTKLKISFKDAMDRCMVEEGTGIKLLEA
ASQSSKGLYSPYNVSGATSAAGSRTGSRTGSRTGSRRGSIDAGSGFSMNFSSSSFSNSSS
GYGRRF
Download sequence
Identical sequences ENSGMOP00000007001 ENSGMOP00000007001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.