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  Home > Genomes > Gadus morhua 69_1 > ENSGMOP00000007345

Domain assignment for ENSGMOP00000007345 from Gadus morhua 69_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGMOP00000007345
Domain Number 1 Region: 494-658
Classification Level Classification E-value
Superfamily A middle domain of Talin 1 1.83e-67
Family A middle domain of Talin 1 0.000000448
Further Details:      
 
Domain Number 2 Region: 2291-2479
Classification Level Classification E-value
Superfamily I/LWEQ domain 7.46e-50
Family I/LWEQ domain 0.00014
Further Details:      
 
Domain Number 3 Region: 1835-1969
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 2.2e-46
Family VBS domain 0.0000104
Further Details:      
 
Domain Number 4 Region: 1235-1358
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 6.67e-36
Family VBS domain 0.034
Further Details:      
 
Domain Number 5 Region: 197-311
Classification Level Classification E-value
Superfamily Second domain of FERM 1.96e-31
Family Second domain of FERM 0.00000141
Further Details:      
 
Domain Number 6 Region: 664-727
Classification Level Classification E-value
Superfamily I/LWEQ domain 6.08e-26
Family I/LWEQ domain 0.00014
Further Details:      
 
Domain Number 7 Region: 312-402
Classification Level Classification E-value
Superfamily PH domain-like 3.93e-23
Family Third domain of FERM 0.0000182
Further Details:      
 
Domain Number 8 Region: 1467-1552
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.000000000000157
Family I/LWEQ domain 0.0081
Further Details:      
 
Domain Number 9 Region: 777-825
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.000000000000275
Family I/LWEQ domain 0.00046
Further Details:      
 
Domain Number 10 Region: 900-985
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.0000000000654
Family I/LWEQ domain 0.0091
Further Details:      
 
Domain Number 11 Region: 1691-1811
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.0000000424
Family VBS domain 0.046
Further Details:      
 
Domain Number 12 Region: 2000-2129
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.000000151
Family VBS domain 0.018
Further Details:      
 
Domain Number 13 Region: 81-138
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0000168
Family Ubiquitin-related 0.056
Further Details:      
 
Weak hits

Sequence:  ENSGMOP00000007345
Domain Number - Region: 1575-1656
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.000188
Family VBS domain 0.054
Further Details:      
 
Domain Number - Region: 1171-1204
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.000424
Family VBS domain 0.022
Further Details:      
 
Domain Number - Region: 1071-1114
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.0361
Family alpha-catenin/vinculin 0.065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000007345   Gene: ENSGMOG00000006853   Transcript: ENSGMOT00000007554
Sequence length 2537
Comment pep:novel genescaffold:gadMor1:GeneScaffold_2011:197593:266219:-1 gene:ENSGMOG00000006853 transcript:ENSGMOT00000007554 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MVALSLKICVRQCNVVKTMQFEPSTPVYDACRIIRERVPEAQSGQASDYGLFLSDEDPRK
GIWLESGRTLDYYMLRNGDVLEYKKKQRPQKIKMLDGAVKTIMVDDSKTVGELLVTICSR
IGITNYEEYSVIQELTEEKKEEGTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSR
TFREQGVEESETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEF
AGIQAYIQFGPHVEHKHKPGFLDLKEFLPKEYIKQRGSEKKIFQDHKNCGEMTEIEAKVK
YVKLARSLPTYGVSFFLVKEKMKSKNKLVPRLLGITKESVMRVEEKTKDVVQEWPLTTVK
RWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEES
TMLEESVSPKNRSTILQQQFNRVGHVEHGSVALPGIIRSGSVGGPENFNLGSMPSGQQQI
TTGQMHRGHMPPLSLAQQALMGTINSSMHAVQQAQSDLGHVGDLPPLGHDLASRVWVQNK
VDESKHEIHSQVDAITAGTASVVNLTAGEPAETDFSAVGCAITTISSNLTEMSKGVRLLA
ALMDDEVGSGHKLMGAARTLAGAVSDLLRSVEPAAAEPRQTVLSAAGSIGQASGDLLRHM
GEGETDERFQDILMNLAKAVANAAAMLVLKAKNVAQVAEDTVLQNRVIAAATRCALSTSQ
LVACTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS
QALGDLLQHVRRYASRGEPIGRYDQATDTIMNVTENIFTSMGDAXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAYPDNEDQQQRLREAAE
GLRVATNAAAQNAIKKKLINRLEIASKQAAAAATQTIAAAQNAAASNKNTASHQQLVHSC
KLVADCIPQLVQGMRSSQAQPDELSAQLALIMASQSFLQPCSKMVTSAKAAVPTVTDQAA
AMQLGQCSKNLHLPGTQAHEACGPLEIDSALKTVHTLRSELQDAKMSVIDGQLRPLPGES
LGKCAQDLGSTSKAVGSSMAQLLTCAAQGNEHYTXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDAESQQRLAQVAKAVSHSLNNCVNCL
PGQKDVDMALRSIGEASKKLLVDTXXXXXXXXXXXQTELNHTAAELNHSAGEVVHSSRGT
SSQLAMASGKFSQDFDEFLDAGIEMAGHTQSCDDQIQVIGNLKNISMASSKLLLAAKSLS
VDPGAANAKNLLAVAARAVTESINQLITLCTQQATGQKECDNALRELEAVRGLLDNPNEP
VNELSYFDCIESVMENSKVLGESMAGISQHCKTGDVAAFGESVGVASKALCGLTEAAGQA
SYLVGVSDTNSLSGQVGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSSATIVAKHTS
ALCNACRLASSKTSNPVARRQFVQSAKEVANTTANLVKTIKALDGDFSEENRNKCHVATS
PLIQAVENLSTFANNPEFASIPAQISHEGSAAQEPIVRSARCMLDSSTYLLETARSLVLN
PKDPPTWSVLAGHSRTVSDSIKSLITSIRDKAPGQRQCDYSIDNINKCIRDIEHASLAAV
DLTLPCRDDISMEALQDQLTSSVQEIGYLIDPVSTSARGEAAQLGHKVTRLASYFEPLIV
ASVGLASKLLDQQQQMTILDQSKTLSESALQMLYAAKEGGGNPKAAHTHDAISEAAQLMK
EAVEDLMVTLNEAASEGGXXXXXXXXXXXXXXXLDEGTPPDPRGSFVDYQTTMVKFSKAI
AITAQEMMTKSVACTEELGGLASQVTGEYGQLAQQGRLAAATAEPEEVGFQIKTRVQELG
HGCIHLVQKAGALQVSPTDSFSKKELIDCARAVTEKVSLVLSALQAGNRGTQACITAASA
VSGIIADLDTTIMFASAGTLNPEDDECFADHRESILKTAKALVEDTKLLVAGAASSQDRL
AQAAQSSAQTITQLTEVVKLGATSMGSDDPETQVVLINAVRDVAKALAELISATKCAAGK
PADDPSMYQLKSAAKVMVTNVTSLLKTVKAVEDEATRGTRALEATIECIKQELTVFQSKA
VPDKSTTPEEFIRMTKGITKATAKAVAAGNSTQQEDVIATANLSRKVVSDMLATCKQAAC
HSEVSEEVRHQALQYGSECTLGYIDLLEQVLQVLQRPTGEQKQQLVVHSKRVAACVTELI
QTAEAMKGSEWVDPEDPTVIAETELLGAAASIEAAAKKLEQLKPRAKPKQADESLDFEEQ
IVEAAKSIAAATSALVKSASAAQRELVAQGKVGSNLANAVDDGQWSQGLISAARMVAAAT
SNLCEAANASVQGHASEEKLISSAKQVAASTAQLLVACKVRADQDSEAMRRLQGAGNAVK
RASDNLVKAAQKAAFDKADDANVVVKTRFVGGIAQIIAAQEEMLRKERELDEARKKLAQI
RQQQYKFLPSELREDHS
Download sequence
Identical sequences ENSGMOP00000007345 ENSGMOP00000007345

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.