SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000011091 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000011091
Domain Number 1 Region: 44-115
Classification Level Classification E-value
Superfamily ClpS-like 0.00000000000035
Family Adaptor protein ClpS (YljA) 0.023
Further Details:      
 
Domain Number 2 Region: 592-671
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00000000435
Family ELL N2 domain-like 0.028
Further Details:      
 
Weak hits

Sequence:  ENSGMOP00000011091
Domain Number - Region: 974-1026
Classification Level Classification E-value
Superfamily RING/U-box 0.0141
Family RING finger domain, C3HC4 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000011091   Gene: ENSGMOG00000010333   Transcript: ENSGMOT00000011392
Sequence length 1560
Comment pep:novel genescaffold:gadMor1:GeneScaffold_2004:295102:311735:-1 gene:ENSGMOG00000010333 transcript:ENSGMOT00000011392 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SVLDPVLHERAEQLFRCLLRYVTEMLVWEKYYELPEDLEPRVDEEVYLCVLYNDDHHSFD
HVIYSLQRSIKCTQAVAQAHTALIDKEGRWIVKKGTVLACQEVNDLIESNSKHISQEALR
VEVLLYAVVAHQTFALRLGNWFQKIVGYSVGFRQIFSQVFLEIDRYQDPCFVSQLMLHDF
VMPTARRIVYELIFCSLLMDTESKRLFAIEFTKNYDMLQQCFIFDYHDRSIFISSLSVQI
FTVPTLARHLIEEAKVIKVIVGTIMEVLKGHLCDSNRFQFQGYNSDKFFRIHVIFHDLRY
ILISKPTEWTDALRTAFLEGFKAFLDLLGCMQGMEEVKRQFGQHIEVEPEWEAGFSLQIQ
LRHILSMFQDWCASDETVLLQAFRECHGALIHCNHRANQSEPTDFYMCKQILHIRPYKVS
QEPVSIHLPISRLFAGLYLHLCRTGAIERLHQHLILLFQASYDYTYLAEHSLRCLVLVAQ
VSAEMWRRNGLSLVSQVYYYQDVKCRDEMYDKDVLMLQIAASKMDPNHFLMLLLLRFELF
DVFNGSKKKTLSELLKQWNRLTEEMLFLLIVIIGERYVPGVSEVTKEDVTMREVIHLLCI
EPMAHSGLVKGLPENESHETGLESVISKVSNFKKPGVSGHGLYEVKKECLPEFNPFFYHY
SKSQHSKAEDSQKKRRAQEGTDQALRPPVPPAFCPAFSSVVRLLSCDIFVHILRRVLQRA
AKDRSTQWTEAMVQRALHLIGQALLEEKSQLEAAADEEVAFDFSVKARGLGSEHSKSVFQ
LLTKVKSLPALEGHSDMVKWILQMFESVKCHREKNCPTASVSMDTSKPEPEVAQDKDKAE
RKRKADAAKLHRQKIMAQMSAMQRNFIESNKMLYDNMPDSRPPGPAATSSESSSVPEQRE
RCVALGPQRGSTPAQREVLTCILCQEEQEVAALSQAMVLTACVQRSTVLTQCRGKALGTP
SNSLFMSPELVVGTHTGSCGHIMHSSCWQKYFEAIQNTTRNRLHAELIIDLENGQYLCPL
CKSLCNTVVPLVPLEPLTIDYENAEIVGQHLTLPRWILILLARINGLKSINHSSGEGRPD
FRSILSFGVQEPRKFSDSIAEMLVVCATTVHRVGLETPPNELCPHVPTMAWNTCAFTIQA
IENVLQEEDKALFGSLQNRQLVGLNAVIQFSAAQRLKSSQAVIQTHFTDMLAVLLPTISR
ENTPSILEVDFFHLLVGMVLSVPALYHEEAVELQPSAVSSAYNHLYILHLVTMAHLVQVL
LTSGTNHFPAAAGGEEGEEARAAAELYITLTQLTTGLSSDVSGSAVAEGVKRAITPFLRC
TALFFNGLTGVPPPVEISSTAXXXXGHTEALCSYLALPSNLFQLFWEHRESVRPLLQRWC
QDPAVTKAQKGEIQTVRYPRRRNHLIDLPADYSSLLNQASHFKCPKSNDGERKHPTLCLV
CGTMLCSQSTCCQSQLEGEDVGACTAHAATCGAGVGVFLSIRECEIVLKASKTRGSTYPA
PYLDDYGETDPQLVRGNPLHLCPERYKKLHQLWQQHCVLEEIARSLEVDNVMFALEWQML
Download sequence
Identical sequences ENSGMOP00000011091 ENSGMOP00000011091

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]