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Domain assignment for ENSGMOP00000013242 from Gadus morhua 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSGMOP00000013242
Domain Number 1 Region: 714-783
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000000224
Family IBR domain 0.00021
Further Details:      
 
Domain Number 2 Region: 32-123
Classification Level Classification E-value
Superfamily PUG domain-like 0.0000000000157
Family PUG domain 0.0067
Further Details:      
 
Domain Number 3 Region: 632-697
Classification Level Classification E-value
Superfamily RING/U-box 0.000000406
Family RING finger domain, C3HC4 0.01
Further Details:      
 
Domain Number 4 Region: 346-373
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.000000419
Family Ran binding protein zinc finger-like 0.0029
Further Details:      
 
Domain Number 5 Region: 289-314
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.0000392
Family Ran binding protein zinc finger-like 0.0038
Further Details:      
 
Domain Number 6 Region: 799-864
Classification Level Classification E-value
Superfamily RING/U-box 0.0000742
Family RING finger domain, C3HC4 0.023
Further Details:      
 
Weak hits

Sequence:  ENSGMOP00000013242
Domain Number - Region: 241-268
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.000471
Family Ran binding protein zinc finger-like 0.0036
Further Details:      
 
Domain Number - Region: 513-547
Classification Level Classification E-value
Superfamily UBA-like 0.0102
Family UBA domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000013242   Gene: ENSGMOG00000012365   Transcript: ENSGMOT00000013593
Sequence length 1000
Comment pep:novel genescaffold:gadMor1:GeneScaffold_3079:31354:60921:1 gene:ENSGMOG00000012365 transcript:ENSGMOT00000013593 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LPPCSKYCLVSAETMVMENSFGSNRKETLASLQRLSTALNILEKYGCNLTNPNRPKYWRT
VKHNNPVFRATVDAIQGGRAVLCLYGYSHQQMDGLSFPEDVVEPDVGQVARVTLEVMSLR
MELDLLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCTICG
IFSVAFHCPACAQWLCTECDRLYHSYPERANHQRSPVTSSSSXXXXXXXXXXXXXXXXXX
SSSTWHCHHCTKVNSIRDVLCETCERPRLASSSTAAEEAQPSTTTGLPPEWQCKSCTVVN
AASSILCEVCERPRLATRPPVTPTHPAVTPPRPPAPVLGMPGDPDNQVQWVCQFCTYLNY
SPSTVCEMCDLARPEPAPMPVKLRPPSPVRRVPALPVKPKNPPPEEPEARRQRLLQEEGL
RLIQLIRDGEKRDLSPEEVYTGMRVAGDTSVLPCEWLRDELPLLLDHICXXXXXXXXXXX
XXXXXXXXXXXXXXXXXDTERAARQALRDRGLKVKELSSLGFEDEQLCHEVLRQSRGELH
GALALLQRPLLEPFHQRMWSDKPEQPLDVRHPDKQRTCRRLLAVYDLPSWGRCELALSLL
LESNATYCLEDVVQAVRESHDREFIKRVLAKECPICLSIFPHSKMQSLTSCQCSVCCGCF
RQHFTIVVRDKHIRDMVCPVCWEPDINDPEHLNSYFSTLDIQLRECLEPEVYELFHKKLT
EQALIKDPKFLWCSHCSYGFIYDGHQLKVTCFQCRKSFCAQCKKPWESQHAGLSCEQYQS
WKRENDPEYQRQGLAGYLRDNGITCPNCRFQYALSKGGCMHFCCSQCRYQFCSGCNNPFH
TTCAVDQCSVSGLHAHHPRDCLFYLRDWEPNRLQALLQXXXXXXXXXXXXXXXXXPGLCG
VIEQKDEAAQQSDAACGAQTQPGHAGLCEKHYREYLVSLINGYSIDPAPLFNANELGLAC
RRYQVEDARGEGEDDFGYYNRLLEKLMHEVPLGDKVPRNK
Download sequence
Identical sequences ENSGMOP00000013242 ENSGMOP00000013242

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