SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000015178 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000015178
Domain Number 1 Region: 349-595
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.28e-86
Family ABC transporter ATPase domain-like 0.0000012
Further Details:      
 
Domain Number 2 Region: 6-42,73-340
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 9.68e-61
Family ABC transporter transmembrane region 0.00024
Further Details:      
 
Domain Number 3 Region: 615-931
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 1.31e-60
Family ABC transporter transmembrane region 0.0014
Further Details:      
 
Domain Number 4 Region: 942-1126
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.98e-60
Family ABC transporter ATPase domain-like 0.0000108
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000015178   Gene: ENSGMOG00000014190   Transcript: ENSGMOT00000015568
Sequence length 1127
Comment pep:novel genescaffold:gadMor1:GeneScaffold_1311:14091:29857:1 gene:ENSGMOG00000014190 transcript:ENSGMOT00000015568 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
FRFASRQDSVMMVVGGVCALLHGAASPLMLLVYGMMTDTFVAYELEVQELADPNKTCQNN
TIWWINQSMVDIETQMTMFAYYYIGIGLGVLILSYFQIALWVSAAARQVQRIRKTYFRKV
MRMEIGWFDCNSVGELNTRISDDINKINNAIADQVSIFIERISTFVFGFMVGFIGGWKLT
VVVIAVSPLIGLAAGLMAMAVARLTGRELAAYAKAGAVADEVLSAIRTVAAFGGEDKEVE
RYDRNLEEAQSWGVKKGSIIGVFQGYLWCIIFLCYALAFWYGSKLVIETKELSPGTLIQV
FFGVLMAAMNLGQASPCLEAFACGRAAASTIFATIDREPEIDCFSEEGHKLDRVTGDIEF
HDVSFHYPSRPDVTILDHLSMVIKAGQNTAFVGPSGSGKSTTVQLIQRFYNPKEGKVTLD
GHDVRGLNIQWLRSLIGVVEQEPTLFATTIAENIRLGRPAVSMEDITAAAREANAYDFIM
GLPQKFDTLVGEGGGQMSGGQKQRIAIARALVRRPRILLLDMATSALDNHSEAVVQKALD
TARRGRTTISIAHRLSTVRSADVIIGFEHGRAVEHGTHSQLLERQGVYFTLVTLQDQQPG
EEAPEQLVEPAPVLRVLRYNRPEWPYMLLGSLGAAVNGSVNPIYAILFSQILGTFAMQDL
IQQREQIDGICILFCIVALVSFFSQFLQGYAFAKSGELLTRRLRRAGFQAMLRQEVGWFD
DPGNSPGALTTRLATDASMVQGATGSQIGMIVNSLTNIGASFIIAFYFSWKLTLVVMCFL
PLIGLSGVFQAKMLTGFATEDKKAMEAAGQVSGEALSNIRTIAGLSQESAFVASYEQQLE
APYHSALRKANVYGVCFGFAQCVIFMAYAASFRYGGYLVTAEGLHYIVVFRVISAVVISG
TALGKASSFTPDYAKAKIAAGQFFKLLDRVPTISTGPSHGEKWDNFKGEVEFRDCKFTYP
TRPDVQVLNGLVVSVKPGQTLAFVGSSGCGKSTSVQLLERFYDPDEGQVLIDGRPSWSVN
VAFLRAQMGVVSQEPVLFDCSIAENIQYGDNLRNASMEEIVNASKKAFLHDFVMTLPDKY
ETQVGAQGSQLSRGQKQRIAIARAILRNPKILLLDEATSALDTESEK
Download sequence
Identical sequences ENSGMOP00000015178 ENSGMOP00000015178

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]