SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000017277 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000017277
Domain Number 1 Region: 549-600
Classification Level Classification E-value
Superfamily Eferin C-derminal domain-like 0.0000000000000123
Family Eferin C-derminal domain-like 0.00043
Further Details:      
 
Domain Number 2 Region: 16-80
Classification Level Classification E-value
Superfamily EF-hand 0.0000000214
Family Polcalcin 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000017277   Gene: ENSGMOG00000016099   Transcript: ENSGMOT00000017706
Sequence length 600
Comment pep:novel genescaffold:gadMor1:GeneScaffold_85:10988:19355:-1 gene:ENSGMOG00000016099 transcript:ENSGMOT00000017706 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDGYVLPDRNQFLQFLKKLKEVFDACDEHADGFIRVQRFVDLGLRFGQGDEVKTLTKFLD
PNAHGKINFKDFCHGVFAIKGCEDMFEAAVGPYFVPSGSFTDNGYIYQXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXSSPASAILGEEQFEDYGEGVDLTPSSPGGEDAQTGFSHRGTSAGQTPPKMRPLDNNEL
LDVFCSQCCKKVNLLNDLEARLRDLKASSPNRKMSSRAFGRQLVQSNAGVFGGSAASSTE
DLLADSMEPCDITEKVIFLEKKVTELESDRAANGDLKSKLKQENTHLVHRVHELEEEVKD
VEVRAEQSLEEELRRHKEAYGRVQREHSAQIELLSNKVQQLEENNQEMKLNVCRLKSQTE
KLDQEKQRMTDQLEDSSLQLKDEMELYREVVDQLWLHRHQFHKEKEAMQEVTEDLRRQLE
RLQLFRLEVEQPGEGWGRAQARAREVQLEVKRLQQENHKLRDQNDDLNAQILSLSLYEAK
NLLASHTKAQCLAAEIQTATRDELVDAVKEQEENNYRLRQYMDKIILAILDHNPSILEIK
Download sequence
Identical sequences ENSGMOP00000017277 ENSGMOP00000017277

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]