SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000018102 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000018102
Domain Number 1 Region: 1040-1173
Classification Level Classification E-value
Superfamily PRC-barrel domain 3.53e-54
Family RIKEN cDNA 2310057j16 protein (KIAA1543) 0.00000464
Further Details:      
 
Domain Number 2 Region: 211-313
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 0.000000318
Family Calponin-homology domain, CH-domain 0.0088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000018102   Gene: ENSGMOG00000016798   Transcript: ENSGMOT00000018549
Sequence length 1174
Comment pep:novel genescaffold:gadMor1:GeneScaffold_3257:563214:580241:-1 gene:ENSGMOG00000016798 transcript:ENSGMOT00000018549 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TDILPNHFYDPAKAKIYANLRWLFAKAYGPDLRELFYVDQYEQEHIKPLVLQLLLSGELY
CSVCSLILKGFKTPQSSASMSLHSHQAVLKALLRRGVHVVEADEYVSDSDLSSAPIKMSA
HITLIDALMTAYASERVSSDRPGSGSGRFSNPAAFSQGPLDLEGTLISWINKVIVKMREV
SDSEQMRKEHLRDSYSYQTGRCRLSRRAPYYFPLVEDLMNNIFTATALLTLIHFYCPALI
RLDDICLKEIPPVAEGISNIQLLMAFSNKHLNSAFYLKMEDMLYCPLTLKNNMMAFIAEL
FWVFEKVKPTFVQPRDSQDMKDGLRTKPSFSACEPQDSILSWTERRKRPLYHEEPYSLHT
PPFEGAGFSLALGSMAPIRLTRAPRHPAGPQGAPGRAKAQGLLGHVYISDEENEAEEEEL
VVIIHSPRCGDGTALQTAASLTGFSVDHPAQESFYLEPLVPAVSKPAKEKSVCLNKQDES
GEEPEDKEDNRCPSPCLSTTSQASSSCCSASDSTSVRMTTFADRKLKKKNLRNCGSSPTG
SSQKFPLDEPAITRSFLRAVRGDHKSSWQGKESLGGLKSELLQLHMQLVEQQRAIEGQKK
KMETVFTQQRLELGKAAFLNVIKKGGGKSDTLPRPLKKSSELYSDRRMEKIHPSKDDSCL
DEVLLKEPGPGTETESGRRDKRLHPAGLSHVGPELDVYGFCYSLDNLNKSVSSIQQKIMQ
LSLQQSRLMKLTKPTELRLNKEDSKPESAKPSTHSPPRDPRSSEDLEPVRSPIRTSPRGS
TFTVPCDTNQRLALGEETLSVPDGPLPSSRAAESDEEDKASSSEKGDPIEEEADSVRRDV
MEEDLSADRGDPSDCRAEQKNGLLFYKEKEMEEDEMAKRRAAFLLKQQRKAEESRLRKQT
QEAENELKRDEARLKAEEDRVRKEEEKIRRELIKQEYLQRKQQELLEEQGAVKPRPSPAR
RPRLKSPHPGSLCPRPHEPSSSQRGSTLSLAGEPDDFPSGRSLRSASVRCGSYSRCSEDS
FSVMSMDWDKRSTASFSLTADYNGPKLFKEPTSKSNKSIIINAIAHCCLAGKVNESQKNV
VLEELEKCKANHLLILLRDGSCQYRGIYCYLTDTEEIIKFLGTGPRTITRKMTDKLYKYS
CDRKQFGLMPTKTLSITVDAVTIHNHLWQVKRKG
Download sequence
Identical sequences ENSGMOP00000018102 ENSGMOP00000018102

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]