SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000019967 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000019967
Domain Number 1 Region: 27-183
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 2.6e-30
Family Calponin-homology domain, CH-domain 0.0027
Further Details:      
 
Domain Number 2 Region: 190-269
Classification Level Classification E-value
Superfamily GAS2 domain-like 3.14e-30
Family GAS2 domain 0.00000847
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000019967   Gene: ENSGMOG00000018569   Transcript: ENSGMOT00000020457
Sequence length 300
Comment pep:novel genescaffold:gadMor1:GeneScaffold_1298:718874:731814:1 gene:ENSGMOG00000018569 transcript:ENSGMOT00000020457 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MCSLLSPKQPPGPGLTDMLQYQQWLESRHEASLLPMKEDLAIWLTHTLGVEITGESFMDR
LDNGVLLCQLAETLQEKFXXXXXXXXXXQTLPSRRIPCRRSAPSGSFFARDNTANFLAWC
RSVGVGDTCLFESEGLVLHKQPREVCLCLLELGRIASRYKVEPPGLIQLEKEIELEEKKS
TASKKSTGKLLDDAVKHISEDPPCKCTNRFCVERQSQGRYRVGEKVLFIRMLNNKHVMVR
VGGGWETFESYLLKHDPCRMLQISRVEGKTSPVTSGRTPMIKDLGPDSYLVVAAHYRSKK
Download sequence
Identical sequences ENSGMOP00000019967 ENSGMOP00000019967

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]