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  Home > Genomes > Gadus morhua 69_1 > ENSGMOP00000020478

Domain assignment for ENSGMOP00000020478 from Gadus morhua 69_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGMOP00000020478
Domain Number 1 Region: 37-131,167-275
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 3.41e-68
Family Calponin-homology domain, CH-domain 0.00000344
Further Details:      
 
Domain Number 2 Region: 295-415
Classification Level Classification E-value
Superfamily Spectrin repeat 5.37e-33
Family Spectrin repeat 0.00012
Further Details:      
 
Domain Number 3 Region: 814-950
Classification Level Classification E-value
Superfamily Spectrin repeat 1.83e-24
Family Spectrin repeat 0.0034
Further Details:      
 
Domain Number 4 Region: 1222-1374
Classification Level Classification E-value
Superfamily Spectrin repeat 1.83e-24
Family Spectrin repeat 0.00097
Further Details:      
 
Domain Number 5 Region: 1541-1688
Classification Level Classification E-value
Superfamily Spectrin repeat 1.22e-21
Family Spectrin repeat 0.0019
Further Details:      
 
Domain Number 6 Region: 424-526
Classification Level Classification E-value
Superfamily Spectrin repeat 2.16e-21
Family Spectrin repeat 0.0006
Further Details:      
 
Domain Number 7 Region: 1690-1808
Classification Level Classification E-value
Superfamily Spectrin repeat 8.64e-21
Family Spectrin repeat 0.0028
Further Details:      
 
Domain Number 8 Region: 599-716
Classification Level Classification E-value
Superfamily Spectrin repeat 2.09e-20
Family Spectrin repeat 0.00062
Further Details:      
 
Domain Number 9 Region: 1451-1585
Classification Level Classification E-value
Superfamily Spectrin repeat 2.62e-20
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 10 Region: 1858-2013
Classification Level Classification E-value
Superfamily Spectrin repeat 2.23e-19
Family Spectrin repeat 0.0033
Further Details:      
 
Domain Number 11 Region: 1125-1254
Classification Level Classification E-value
Superfamily Spectrin repeat 3.17e-19
Family Spectrin repeat 0.00027
Further Details:      
 
Domain Number 12 Region: 692-806
Classification Level Classification E-value
Superfamily Spectrin repeat 1.57e-18
Family Spectrin repeat 0.0027
Further Details:      
 
Domain Number 13 Region: 917-1054
Classification Level Classification E-value
Superfamily Spectrin repeat 2.45e-17
Family Spectrin repeat 0.0036
Further Details:      
 
Domain Number 14 Region: 528-635
Classification Level Classification E-value
Superfamily Spectrin repeat 4.89e-16
Family Spectrin repeat 0.0008
Further Details:      
 
Domain Number 15 Region: 2347-2450
Classification Level Classification E-value
Superfamily PH domain-like 0.00000000000000182
Family Pleckstrin-homology domain (PH domain) 0.0037
Further Details:      
 
Domain Number 16 Region: 1060-1163
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000046
Family Spectrin repeat 0.00018
Further Details:      
 
Domain Number 17 Region: 1385-1480
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000034
Family Spectrin repeat 0.0033
Further Details:      
 
Domain Number 18 Region: 2025-2077
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000374
Family Spectrin repeat 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000020478   Gene: ENSGMOG00000019018   Transcript: ENSGMOT00000020979
Sequence length 2473
Comment pep:novel genescaffold:gadMor1:GeneScaffold_2572:26417:104166:-1 gene:ENSGMOG00000019018 transcript:ENSGMOT00000020979 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MANASPDLDNAEAQRQLNNNNRPISSGLWDTECTSSKLFECSRIRALADERDAVQKKTFT
KWVNSHLSRVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLEXXXXXXXXXXXXXXXXXXXXXXXXXXXIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFNKLTRSNATHNLQQAFNIA
EQSLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLENCVEAE
KIVNRYEGLASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEDRIGVV
VELAGEMEAEGYYDIRRILARKENILGQWGLLKELVVGRKARLEQNLALQKTFQDMVYMI
DWMEDTQAQLLSQDFGKHLLEVDDLLQTHSLQEADISVQAERVETLNSAALKFTTLEGYQ
PCDPQVICNRVNHVSTCLEELKQLADKRHEDLEESRQLWAFFQELEESAVWIREKSSILG
AQGYGKDVTSVLKLLQKHKTLAGELLAHRSLLQNTIKRGKQILSEQSFGAAGIQDHILEV
KADWKNLEDQAALRLHHLQEALNASQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTRSL
LKKHRDVSDAVDKHRSHVVALRQHLGALPAQYRDQEEIQVRMGEAEQLYTEVVEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEVPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNQIVELVEQRKDHLDSVLRLQNYLL
ECTEIKSQIQDKRKAIDATQYAGSDLGGVLALQRRLSTMEGALSVLEPKLMHLQEEAEHL
ASAQPARAMEVLVPFEGISVEWEELKRTLQGCEDSLMVAGRLQSFIXDLDSFLTWLVQTQ
TSAASDQLPNTLEEAEKLINKHAALKEEIGRYEEDYERLQAVNELLETEEAPLPHAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALALVEVPTTVE
TVEAALRKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSDRIRQRVDALASRGNQNRD
LAQQWLEKLNVQWVLQRFHQDCHELGDWVCEKMLMARDSSRDETQNLHKKWLKHQAFMAE
LAQNKEWLDKIEREGQQLMQEKPELGPVVQQKLGEIRECWQDLETTTQAKARQLFEANKA
DVLVQNYSSLNQRLGQLEGELCYVDRGQDLTSVNKQLKKLQGMECQMEEWYREVGELQEQ
ATSMTQQGKVKETVAERQAAVETRMVRLIEPLKERRRLLLASKEVHQVRRDLEDEILWIQ
ERLPMAMSQEHGSTLQSVQQLMKKNQTLQRELQGHRSRVEDVVERASLIATLRSHEADVI
RAGLEQMSQLWAVLWGETERRQLVLDVMYQAQQYYSDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLILEQTIEDYAETIGLLSQQCRQLLEMGHPDCEKISRRQSQMDRLYVSL
KDLVDERKSRLEQQYWLYQLNREVDELEQWVAQRDVVASSPELGQDYEHVTVLQEKFTDF
ASETVTVGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELMETRAQMLSA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRALKGGAANTSSLHRLMHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEGIACREQEVMLTWKELLTYCEECRVQITTATDKLRFFGMVR
DQLMWMDSIICQIDTGDKPRDVSSVEVLMNYHHGLKNEVEARSRSLMECIEMGKTLLAVR
NPAAEEIKEKLDKVVAKQHELSEKWDKHWEALQHXXXXXXXAQEAVVAEAWLTAQEPFIS
SKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRITTVEKLRAEQSQLPPTPLLGRK
VFLEPQDAAPNPATLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXGHEGRRRDRDRHRLEKQESSEHETGEKRSTLADIVEQLQEREAAQ
PDHPPSLPPRRQARGEVPPVPNGERPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXTTPSAPRVPSHTAHHEGFLFRKLDIETLKKSANRWAFRVTAARLFTLRGKAGGWTPAL
ALCTCDVTNGYKKKKNVFTLKTKDGSEFLFHAKDEDDLKAWVGNITASITEHDEIARWGQ
PQPTTSSTDEGTR
Download sequence
Identical sequences ENSGMOP00000020478 ENSGMOP00000020478

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.