SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000020546 from Gadus morhua 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000020546
Domain Number 1 Region: 715-925
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 8.63e-50
Family BCR-homology GTPase activation domain (BH-domain) 0.0000691
Further Details:      
 
Domain Number 2 Region: 224-493
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 6.28e-19
Family BAR domain 0.057
Further Details:      
 
Domain Number 3 Region: 637-697
Classification Level Classification E-value
Superfamily Cysteine-rich domain 0.00000000109
Family Protein kinase cysteine-rich domain (cys2, phorbol-binding domain) 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000020546   Gene: ENSGMOG00000019084   Transcript: ENSGMOT00000021048
Sequence length 1118
Comment pep:novel genescaffold:gadMor1:GeneScaffold_544:15534:56137:1 gene:ENSGMOG00000019084 transcript:ENSGMOT00000021048 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLRQSSGGGGAAKLSLSIPRFSNTNEHSSGPAGQRVQDQGPEGSEGSEVPATANPDYIMQ
LVSDVRKFADVLLHLKEVFSSEEHQDCLHQAVHERLGQLLCVLKTVIGKHQSLNSVDILS
AAGIVISRVKGVNFKEVNSDNKRKLFGEIYTAIDTLAFTFGNVVSDFLMGDVESGAAVGL
ALTKRSRSFENLSVESGGSGPEKDDPTPAQPGEVDAALQRSDSGVESALLYAKAWSKYTK
ELLVWVERRLAMDIECAKSYAKMAESAKNLASQQEFMAFREIYMSAFRNDIEYSQLLLHT
AAVLQSNKFVLPLQTRKSELDKLRKEVKEQWQREQKRMHDADSALRKARLLRGQRQEEHQ
KARAATGRAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEAREHCRACQMDVGVKRAD
MAATKSLILSQLREMVFQCDLTLKAVTVNWFQLQQAQVVSLPVNHQSLCERAKLYEPGQR
YVQYVSSLPAGSVFSKRPLTGSHSSQCNLSSAGSGPADCLSADEVDSPVNARPAKISERR
SNSSTDIQALRIQGPFRPWASASQGGGMCSDSESAGGSSESRSMDSPTASPGDFKRRLPR
TPSTGTMSSADDLDEREPLSPFESDMGTEMASSPGPFRNTQMSKAAQTHKLRKLRAPSKC
RECDSLVVFHGAECEECSLACHKKCLETLAIQCGHKKLQGRLHLFGIDFTQASKDSPDGV
PFIIRKCTSEIEARALNLKGIYRVNGAKSRVEKLCQAFENGKELVELSDLYPHDISNVLK
LYLRQLPEPLIMFRYYNDFIGLAKESQAVIIEELEASRHSPPPETPAQVSVELNRVLFKI
KDLLRQLPSTYYKTLQFIIQHLHRVSERAEENKMTASNLGIIFGPTLVKPRQADAEVSLS
SLVDYPYQALIVELLVRHYQMIFDTPLSPLPGGEVEARPSPAKPQQLSRHSKSLGDIKEQ
SSKVYKRHSSIIPSSHLLAEVKETIPGLDRTDRTDYEPGQCWKXXXXXXXXXXXXXXXXX
XXXFRAPRTLRPPPGTFYKPPSTGARAKLLQSSSQAHSIEIEVSVDEPPEEEEEEEEEVP
LSSSSSPEELGQGQARPLYQRLRPRRLQEVEHREAHFV
Download sequence
Identical sequences ENSGMOP00000020546 ENSGMOP00000020546

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]