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Domain assignment for ENSGMOP00000020627 from Gadus morhua 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSGMOP00000020627
Domain Number 1 Region: 306-505
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 4.45e-27
Family Calponin-homology domain, CH-domain 0.00028
Further Details:      
 
Domain Number 2 Region: 574-603
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000428
Family LIM domain 0.048
Further Details:      
 
Weak hits

Sequence:  ENSGMOP00000020627
Domain Number - Region: 604-631
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000927
Family LIM domain 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000020627   Gene: ENSGMOG00000019183   Transcript: ENSGMOT00000021132
Sequence length 646
Comment pep:novel genescaffold:gadMor1:GeneScaffold_4584:859:17817:1 gene:ENSGMOG00000019183 transcript:ENSGMOT00000021132 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EPIRPSHALFDLFVTAESCRDVQKHFSALCEQLQVDPKDFRVFYSKLKERLNYWKAKDLW
VKIDKRASDKDYQQRKACAENKLQLILLKVALVLGVEVLTAVEFQGLEEPSGDKXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXIDLENIVYYKDETHYFVMTAKKKSLLKKGVIKQDYSDAEQL
LARENVDHDALWRYAYEAANFSTNRQLPELEFATNPAGRRDVAMFDFTCMHRAEHASLVR
KRRGKKLLMGLVGDSLVEPFWPQGTGIARGFLAAFDTAWMVRSWGLGVPYLQVLAXXESI
YQLLSQTNAGNTKNDCTSYSIRPSTRYPHVNLSAIKVHQSAGGVEDLLRWCQKNTAGYAG
VEVKDFTLSWTSGLALCALIHHFRPQLIDMSSLNESDAVHNHQLAMDLLERELSISPVVA
ASAMASSGLIDKLSMVLYLTQVHDVLTKNKKADVLDLPKPLTLSRLLSAVYFLSKLKHNS
LQRRKPAAPPVAPEGNLGSVVKGDIEERGPGAASSEDCYSCGQRLYLLARVNAMGKFFHR
DCFTCHKCGHQLRLGGYTFHQTTGFYCELHSEHLGPENGFEDSSDE
Download sequence
Identical sequences ENSGMOP00000020627 ENSGMOP00000020627

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