SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428217501|ref|YP_007101966.1| from Pseudanabaena sp. PCC 7367

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428217501|ref|YP_007101966.1|
Domain Number 1 Region: 24-243,291-351
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000000000691
Family Filamentous hemagglutinin FhaB, secretion domain 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|428217501|ref|YP_007101966.1|
Sequence length 1778
Comment filamentous hemagglutinin family outer membrane protein [Pseudanabaena sp. PCC 7367]
Sequence
MRCYLLLALATFTGLSLAYEKDLQAQVTPDGTTATTVDGNQINPVGSGTVNGNNLFHSFD
QFNVPSSGVIFGTDGSSVDGNSIQNILNRVTGGDPSSIFGAIQSSGAFPNANLYLLNPNG
IIFGAGASLDIGGSFHASTATSLLFDSEQIFRAIADGVFPFGDPKALRFGITEPAAIINQ
GNLAASNNLSLTGGTVISSGNLSANGTVAIAAAPGNSAIELRSPNAVLGLTILPDAVGNE
WQGTIADIPQLARQLTGTSNPEADEVVVNPDGSLALVEISEGLTSSFNEETEQFVTTGNY
AIAPGDVAIKNANAATVQVEADQDIAALVPDLETSGDLSLNAGNELVLRDSAETASTVRA
GGDLTLSAKNGIDILALNHAASRIESGGDLTLQSDGIISGDAIYFSIGDFILKPITPGSV
TNFISLYDPIIRSAGNVDLAGDYSGTSLLVEAAGSITTDGIEITGPDLFSPEPALVNNWA
LILRAGVLPGSTTSFPVVEGGSNVTEAPSDGLGNVTVDGPISIIPGIGEDSLVEITATGN
VEINDQIQIISAFGTTNLLGITAEGNVDINALIDARGVDTTITSNTGTINTDVVITHANS
NGGDQIFSAPLGITTGDLDSSSLTSGIAGDIFIDTPGSVNAVSITAEANEGTAGNVLIGL
VDQPSFLISGIISTQNSSAGDAGGVSIQVDDSVNITEIIASSTNLGLGGNVTIDAGGVVQ
IPGGITTTGHEFDAGDVSITTNSSILTGDITTTLEDGDSPGYSAGNINLIATGNDDINVG
NLNASVYGGVIGFAGNAGNVAIDSDSGDISTNNILTISEFANGGGVNLTGQNVNTGYITN
AFSENTSTSPVIISASGEVNTGKIDTSANINSGAIEITGSDVTVNGDLLTASSNISGDIT
VNATGDINVNGDIDTFGSYSGSAGDVSISTTSSSSVTVTGNIYAYGYEGAASGDVTITAL
GNGDINVNNINTNAAQGSSPMSGTAGDVTVNSSTGSIVTGNISAVADSNQSGSISLSGQN
ITVGDINELPVSADSSNVSVVISAINNVSAGDIFTRAFFDGGDVDISGNNIQVGLINTTG
SDFGGDVNIDGNTIILDSIRTESTNGFGGDVDIVFTDFFRAIGFFTGFNGTDASISTDGS
DAGGSVSIVRDPLVTGVDDFLVGDSGIVSESGNGTVSAIVTSNANQILTATIPVEQIQGN
ILIRNSLPNDPPPTDPPPTDPPLTDPPPTDPPPTDPPPTDPPPTPTPTPTPTPTPTPTPT
PTPTTTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPAPTPTPAPNPAPAPSPTRSQEQDVV
DSTLITLDPSLQQPEASLDRQAKIALIDFKRSEADRFLANGQLDAALIAIESGYKSELEV
YTGESLPANIVGLNDGQEIITEASNITKSVTAIVYPIILEDRLEILVIPPKRPEDDNADK
DKSISPDQLGKPFLVTVRGVSESDMNTVVTDFAINLRDPSSDDYLRQSQQLYDWIMRPIH
DRLQAEEVETIVFVMDSGLRVIPPAAFHDGSSFLADQYASATIPALSVSQAILKERDSKN
SRILAMGLTESVDGFAALPAVETEVETITEDVLSGSFFLNEPFTVGNLQSQRGQAKYGII
HLATHARFTSSQEEGAFIQFWDRRLNIKAIGELGLDDPTVEMLTLSACQTAVGESLGLGG
LAIKKGVKSVLASLWPVEDAGTAPLMINFYSRWEDSRSKAIALRESQQSILSGRVRIENG
RAVGIPGLDDVILPDEGAQIDLSHPYYWSSFILVGNWL
Download sequence
Identical sequences K9SH54
gi|428217501|ref|YP_007101966.1| WP_015164511.1.5078

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]