SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jCVI|EIN_037250 from Entamoeba invadens 1.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jCVI|EIN_037250
Domain Number 1 Region: 56-117
Classification Level Classification E-value
Superfamily SH3-domain 0.00000000000131
Family SH3-domain 0.0026
Further Details:      
 
Domain Number 2 Region: 279-331
Classification Level Classification E-value
Superfamily SH3-domain 0.00000000000249
Family SH3-domain 0.0026
Further Details:      
 
Domain Number 3 Region: 141-199
Classification Level Classification E-value
Superfamily SH3-domain 0.000000011
Family SH3-domain 0.0029
Further Details:      
 
Domain Number 4 Region: 205-265
Classification Level Classification E-value
Superfamily SH3-domain 0.000000158
Family SH3-domain 0.0036
Further Details:      
 
Weak hits

Sequence:  jCVI|EIN_037250
Domain Number - Region: 10-47
Classification Level Classification E-value
Superfamily SH3-domain 0.000158
Family SH3-domain 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jCVI|EIN_037250
Sequence length 1074
Comment | organism=Entamoeba_invadens_IP1 | product=synaptonemal complex protein, putative | location=EINV_137:846040-849330(-) | length=1074
Sequence
MDVVGLCQVKSTNPDALYIERGDIINVTEITTSGLWKGKSAHGSGLFSVLSTTLERPPLY
QGKVLYDFVMKNSECLSVHSNDYVTVCEEDGEEDGWVFCKIGTRFGFVPKKYIERIDFTK
NIGKNRMRMTQQVSVASHLPSRLPCKVIGKYEYVASYGKDISFHKDDEMVCLSASDNRWI
LVIHPEYGIGYVPLLYVTCDKSFLTMEIHKFAVALYDFEGESRFHLSAQVGDVMYVESVI
GSWAIVRVNETKYIYPYSFLHVFEDENDLKISESLGFILEKFTPVNENEIEVNKNDFVVI
LLKETNGWTLVRHDNKVGYVPTDFIEKIDEGDRYAMITCKSQCEVFEYAEKFKKTETSTE
ETVKGQIEEKEKTEVQEEQQTEEDTTVSKESIKEIESVIIEETKDQFESIENNQQENTEP
TELKEEEQGTQDESPKEVIQDEKSQSDETKDTTDVQLTVNTQQQITKKKIETSEGDIWIV
FKKIDEETFVGKRGPLLVVLFLNDVELRNLEKPMNPEYEKGRKRLEDKEREFEENVKLHD
EKEKERKRAEEGQKAEEELKQKKETEKAFLRQTMQLKKQQTRATGFRKEGFKRPNVIDPQ
QLELTKSLYEESLLDKSNEKVSSDLTKIEQLKIELKKDHMNKEIIENGIKEILAQNGKLK
KRTTDLEDGGKAILKVIETLKDELKKTREAKESKQTFVPVDPTNQSSTTTTDIITTPNTV
QPQTKRFVGRTRTDSETNSLRAQIEELKKEVEELKKKDQAIVSVENPNLTVDGVKEEEIV
VQNKEVSEDNVNGICKDNVKITEEEKKDETREDSKETITEGTSATLEKVEQIVDNTVGIE
PSNEQPNVQQEQQITETPFKDERDNQIKTLMDENEQLKKMIEELQKVPLKEEQAKGGNDD
KKVDTQAEPLKSVTGPGSLISSENTSFISFEPSSGEQSQDEGASSDIELLKKQLSEEKLE
HKQLKQEFQNFKMKNESKSSQLRRQTVPVKPIEVSPNVTQAELIEFEHKIEEKVKAIKQQ
LSKITTQTNKLSRQSSLTNINSLKTETTEKLGVYKDQLKVLERKLSMMSKSQNF
Download sequence
Identical sequences jCVI|EIN_037250 XP_004260175.1.21224

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]