SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGGOP00000011614 from Gorilla gorilla 69_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGGOP00000011614
Domain Number 1 Region: 401-487,922-999
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.72e-18
Family Canonical RBD 0.00024
Further Details:      
 
Domain Number 2 Region: 272-367
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000129
Family Canonical RBD 0.0026
Further Details:      
 
Domain Number 3 Region: 144-237
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000228
Family Canonical RBD 0.0018
Further Details:      
 
Domain Number 4 Region: 4-86
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000271
Family Canonical RBD 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000011614   Gene: ENSGGOG00000011909   Transcript: ENSGGOT00000011950
Sequence length 1001
Comment pep:novel chromosome:gorGor3.1:8:92606848:92609853:-1 gene:ENSGGOG00000011909 transcript:ENSGGOT00000011950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEIGEAFIIFATDEDARRAISRS
GGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGTSGVDSLSNFTESVKEEASNS
GYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV
DGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNA
VKEGDVLRRSEEHSPPRGINDRHFRKRSHSKSPRRTRSRSPLGFYVHLKNLSLSIDERDL
RNFFRGTDLTDEQIRFLYKDENRTRYAFVMFKTLKDYNTALSLHKTVLQYRPVHIDPISR
KQMLKFIARYEKKRSGSLERDRPGHVSQKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFF
ADFLLAEDDIYLLYDDKGVGLGEALVKFKSEEQAVKAERLNRRRFLGTEVLLRLISEAQM
QEFGVNFSLMSSEKMQARSQSRERGDHSHLFDSKDPPIYSVGAFENFRHQLEDLRQLDNF
KHPQRDFRQPDRHPSEDFRHSSEDFRFPPEDFRHSPEDFRRPREEDFRRPSEEDFRRPWE
EDFRRPPEDDFRHPREEDWRRPLEEDWRWPLEEDFRRSPTEDFRQLPEEDFRQPPEEDFR
WLPEEDFRRPPEEDWRRPSEEDFRRPLQGEWRRPPEDDFRRPPEDDFRHSPEEDFRQSPQ
EHFRRPPQEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFR
RPPQEHFRRPPQEHFRRSREEDFRHPPDEDFRGPPDEDFRHPPDEDFRSPQEEDFRCPSD
EDFRQLTEEDLREAPEEDPRLPDNFRPPGEDFRSPPDDFRSHRPFVNFGRPEGGKFDFGK
HNMGSFPEGRFMPDPKINCGSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYN
EQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGSRKVKLTLL
Download sequence
Identical sequences ENSGGOP00000020957 ENSGGOP00000011614

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]