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Domain assignment for ENSCHOP00000004153 from Choloepus hoffmanni 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCHOP00000004153
Domain Number 1 Region: 276-417
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.34e-16
Family Retroviral integrase, catalytic domain 0.0082
Further Details:      
 
Domain Number 2 Region: 46-77
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000445
Family KRAB domain (Kruppel-associated box) 0.0056
Further Details:      
 
Weak hits

Sequence:  ENSCHOP00000004153
Domain Number - Region: 104-235
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 0.0178
Family FCH domain 0.044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCHOP00000004153   Gene: ENSCHOG00000004691   Transcript: ENSCHOT00000004706
Sequence length 492
Comment pep:known_by_projection scaffold:choHof1:scaffold_21903:3734:5763:-1 gene:ENSCHOG00000004691 transcript:ENSCHOT00000004706 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TPSFLVVPSTVSSPVLLKLFLGLGTQKEKSLQQPALFQEAGTDNMTENWKYVEASQKGCY
RDTMLDGYERMVPPGSFLQFSMLPQRAGNDPSGVSNMSEVEMEIRDMREKFLTNVTKLVE
SKSYNSKVFSKEKYFQTIKEVKEAKEKGKKSSRDYRRAAKYDVISVKDMERLIEATHGER
DRIRYYVHKEELFDILHDTHLKIGHGGRTRMLKELQGKYGNVTKEVIVLYLTLCKQCHQK
NPVPKRGLVPKPGTSKDIDSRCQVEILDMQPNADGEFKFILYYQDHLTKFIILRPLKAKR
AHEVVSVLLDIFTILGTPSVLESDSGIEFTNQVVNELNEVWPDLKIVSGKHPSGQGQGSL
ERASQDVKNMISAWMQSNHSHHWASSLRFLQLLRNQAFDVSLQRSPYEAMFGCKAKLGLY
SSNLPRETVAILQTEEELGIAEEQLENSLWIRQEERAEAGADRSDMDDDVDLAAAEAREP
STSQGNPSLLCC
Download sequence
Identical sequences ENSCHOP00000004153 ENSCHOP00000004153

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