SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCHOP00000010936 from Choloepus hoffmanni 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCHOP00000010936
Domain Number 1 Region: 156-219
Classification Level Classification E-value
Superfamily Homeodomain-like 3.17e-20
Family Homeodomain 0.0015
Further Details:      
 
Domain Number 2 Region: 24-55
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000238
Family LIM domain 0.02
Further Details:      
 
Domain Number 3 Region: 55-83
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000227
Family LIM domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCHOP00000010936   Gene: ENSCHOG00000012355   Transcript: ENSCHOT00000012387
Sequence length 388
Comment pep:known_by_projection genescaffold:choHof1:GeneScaffold_2706:8479:23736:1 gene:ENSCHOG00000012355 transcript:ENSCHOT00000012387 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MMQSAAVPAEGAVKGLPEMLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADC
QMQLADRCFSRAGSVYCKEDFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEAGAKRPRTTITAKQLETLKNAYKNSP
KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQ
EKESSAEDCGVSDSELSFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXVGGASVRQSPSSIRYIPCHAPRLTGLDYTVDSNGISSHAGQGVSQTMRAMAGGPTFD
ISTGSRVGYPDFPTSPASWHDEMDHPPF
Download sequence
Identical sequences ENSCHOP00000010936 ENSCHOP00000010936

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]