SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|343085746|ref|YP_004775041.1| from Cyclobacterium marinum DSM 745

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|343085746|ref|YP_004775041.1|
Domain Number 1 Region: 2-357
Classification Level Classification E-value
Superfamily PLP-dependent transferases 1.28e-88
Family GABA-aminotransferase-like 0.00011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|343085746|ref|YP_004775041.1|
Sequence length 360
Comment DegT/DnrJ/EryC1/StrS aminotransferase [Cyclobacterium marinum DSM 745]
Sequence
MIPVTKPFLPPQGEYEKYLSGIWKRQWLTNMGPLASDLEMKLKSHLGIKHLLYVTNGTIA
LQMAIKALELQGEIITTPFSFVATSSSIVWEGCKPVFVDIDKYSLNIDPNKIEAAITEKT
CAILGTHVYGNPCDMDTIEKIAKKHDLKVIYDGAHAFGVTINGKSIFDYGDLSTCSLHAT
KLYHSIEGGLIMTKDPILLKKLAFIRNFGFNGPEAFAELGINGKNSEFHAAMGLANLGHI
EAIHEQRKILTERYDKMLRNLNASKPVWHRNASLNYAYYPIIFENSEQMLKSLAKLQGNG
IFARRYFYPSLATTLPYVETKAMEITDDIASRILCLPLYFDLTLEEVDLISRLILRVQNN
Download sequence
Identical sequences G0J658
gi|343085746|ref|YP_004775041.1| WP_014021100.1.78327

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]