SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428224050|ref|YP_007108147.1| from Geitlerinema sp. PCC 7407

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428224050|ref|YP_007108147.1|
Domain Number 1 Region: 1-249
Classification Level Classification E-value
Superfamily Ribulose-phoshate binding barrel 2.54e-92
Family Tryptophan biosynthesis enzymes 0.00000069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428224050|ref|YP_007108147.1|
Sequence length 264
Comment tryptophan synthase subunit alpha [Geitlerinema sp. PCC 7407]
Sequence
MTAISDCFQSLRDRQQCALIPFITAGDPDLETTAKALRALDQNGADLIELGVPYSDPLAD
GPVIQAAATRALSKGVRLEMVLEMLREVTPELKAPVVLFTYYNPILNRGIETFLDQAVAA
GAKGLVVPDLPLEEADSLLKPAAEKGIDVILLVAPTSSQDRIRAIAQQAQGFVYLVSVTG
VTGIRSEIQSRVKDLLVDLREVSAKPVGVGFGISQPEQARQVKDWGADAVIVGSAFVKRL
AEGTPEEGVASVAEFCRELKAAIA
Download sequence
Identical sequences K9S4K1
WP_015170663.1.54702 gi|428224050|ref|YP_007108147.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]