SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428225706|ref|YP_007109803.1| from Geitlerinema sp. PCC 7407

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428225706|ref|YP_007109803.1|
Domain Number 1 Region: 1-321,434-475
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 3.71e-65
Family FAD-linked reductases, N-terminal domain 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428225706|ref|YP_007109803.1|
Sequence length 490
Comment zeta-carotene desaturase [Geitlerinema sp. PCC 7407]
Sequence
MRVAIVGAGLAGMATAVDLVDAGHEVEIFESRPFVGGKVGSWVDADGNHIEMGLHVFFGC
YYNLFELMKKVDAFQHLRLKEHTHTFINRGGDVGALDFRFITGAPFNGLKAFFTTSQLSL
ADKAQNAIALGISPLVRGLVDFDGAMKTIRALDHISFADWFRQHGGSDGSLKRMWNPIAY
ALGFIDTENISARCMLTIFQFFAAKTEASILRMLEGSPEEYLHRPIVNYLEERGGKIHLR
RGVRQILFEGEGDQTQVTGLVVANGDSTETITADAYVCACDVPGIQRLVPDAWRRWSEFD
NIFKLDTVPVATVQLRFDGWVTEMHDAARRRQLQEAAGIDNLLYTPDADFSCFADLALTS
PGDYYREGQGSLMQLVLTPGDPFIKQSNEAIAQHVLKQVHDLFPSSRELNMTWYSVVKLA
QSLYREGPGMDPYRPDQKTPIGNFFLAGSYTMQDYIDSMEGATISGRQAAKAILGHAAQR
SSVSQPSVVG
Download sequence
Identical sequences K9S9X4
WP_015172316.1.54702 gi|428225706|ref|YP_007109803.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]