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Domain assignment for HGL_H00000325954-1 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000325954-1
Domain Number 1 Region: 469-565
Classification Level Classification E-value
Superfamily Cadherin-like 3.14e-20
Family Cadherin 0.0016
Further Details:      
 
Domain Number 2 Region: 228-337
Classification Level Classification E-value
Superfamily Cadherin-like 7.57e-17
Family Cadherin 0.0012
Further Details:      
 
Domain Number 3 Region: 143-235
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000006
Family Cadherin 0.0034
Further Details:      
 
Domain Number 4 Region: 569-671
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000157
Family Cadherin 0.0055
Further Details:      
 
Domain Number 5 Region: 338-442
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000104
Family Cadherin 0.0052
Further Details:      
 
Weak hits

Sequence:  HGL_H00000325954-1
Domain Number - Region: 29-124
Classification Level Classification E-value
Superfamily Cadherin-like 0.0011
Family Cadherin 0.0068
Further Details:      
 
Domain Number - Region: 653-710
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 0.0155
Family Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000325954-1
Sequence length 898
Comment CDHR3 (Homo_sapiens) cadherin-related family member 3
Sequence
MQEVVILLLLLEAMSGEALHLIHLPAASNVAENSPPGTLVHKFSVNLSVSLSPVVPGFPL
IINSSPLIEAFRVNRLSGTNFEVVTFGKQQLDFETGPNVFDLQIYVKDEVGVTDLQVLTV
QVTDVNEPPEFQGNLADGLDLFIAERANPGFIYQVEAFDPEDTRRRAPLSYFLTSPSRSF
SVSANGTLFSTTELDFEAGHRSFHLVVEVRDSGGLKASTELRVTIVNVNDEMPFFTSPTR
VYSIPEELHAGTIVANVTAEDPDDDGSFPGHLLYTITTVSKYLVINQLTGTIQVAQRMDR
DAGELRQNPTISLEVLVRDRPSGGQENRIQITFIVEDVNDNPATCSKFTFSIMVPERVAN
GTLLLDLNKFCFDSDSEAPNNTFNFTAPSGVGSSRRFLQDPADSGKIVLIGDLDYENPSN
LAAGNQYTVMIQVQDVAPPYYKSKLFPFPFLENIHISILTSPENEFPLVFERPSYVFEVS
ETRPARTRVGQVRATDEDFPQSSITYSISSGGASPQHPNIFWINPKTGELQLVTKTDHET
TPVYILRIQASNGEDTSSVTVTVNILGENDEKPMCTPNSYFLAIPVDLQVGTNIQNFKLT
CTDLDSSPRSFRYTIGPGNVNSHFTLSPSAGSNVTHLLLASRFDYAGGLDKIWDYKLLVY
ITDDNLLSSRTKARALVETGTVTLSVKVIPHPTTIITTTPRPRVTYQILRENVYSPSAWY
VPFVITLGSILLLGFLVSLIILIAKVIYRHCPCKTGEDKKPLAKKGATDVKRSKSEVVVK
TIQMDTVFDGEAVDPVTGGIYEFNSKTGARKWKDPSAQKPARTEPSAQGTVPAPRKVAAG
EESGLRGSTNQEGDGPSSRERARGAAPGSRSEDGKPRTLKDRNPALEDRTPPKLHAGQ
Download sequence
Identical sequences G5BI33
HGL_H00000325954-1

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