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Domain assignment for HGL_H00000362125 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000362125
Domain Number 1 Region: 226-349
Classification Level Classification E-value
Superfamily Cadherin-like 6.14e-32
Family Cadherin 0.001
Further Details:      
 
Domain Number 2 Region: 441-566
Classification Level Classification E-value
Superfamily Cadherin-like 1.44e-28
Family Cadherin 0.0021
Further Details:      
 
Domain Number 3 Region: 123-230
Classification Level Classification E-value
Superfamily Cadherin-like 1.24e-21
Family Cadherin 0.0047
Further Details:      
 
Domain Number 4 Region: 341-445
Classification Level Classification E-value
Superfamily Cadherin-like 8.64e-21
Family Cadherin 0.0058
Further Details:      
 
Domain Number 5 Region: 556-662
Classification Level Classification E-value
Superfamily Cadherin-like 1.16e-19
Family Cadherin 0.0066
Further Details:      
 
Weak hits

Sequence:  HGL_H00000362125
Domain Number - Region: 25-115
Classification Level Classification E-value
Superfamily Cadherin-like 0.000171
Family Cadherin 0.0073
Further Details:      
 
Domain Number - Region: 700-730
Classification Level Classification E-value
Superfamily HIT/MYND zinc finger-like 0.068
Family HIT zinc finger 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000362125
Sequence length 1145
Comment PCDH19 (Homo_sapiens) protocadherin 19
Sequence
MESLLLPVLLLLAILWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDSRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDGAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRIIALDGGDPPRLGTVGLSIKVTDSNDNNPVFSE
STYSVSVPENSPPNTPVIRLNASDPDEGTNGQVIYSFYGYVNDRTRELFHIDPHSGLVTV
TGALDYEEGHEYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SSPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVLITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPIITAPPLINGTAEINIPRNSGIGYLVTVVKAEDYDEGEN
GRVTYDLTEGDRGFFEIDQVNGEVRTKRTFGENSKASYELIVVAHDHGKMSLSASALVLV
YLSPALDAQESMGSVNLSLIFIVALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSKCLT
ITCLLGCFIKGQNSKCLHCISVSPISEEQEKKAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQST
RNTGASHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYANSRAHLIRSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTNVISMGSQMPDHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNVITLSIEATAADVEAYDDCGPIKRTFATFGK
DVSDQPAEERPTLKSKRNVNVIICSPKVNSAIREAGNGCEAISPVTSPLRLKSHLPTKPS
VSYMVALGPPTRDLEQYINSGPSRPSEAEPRGADNEKVVHEVNTILKEGRDKESPGVKRL
KDIVL
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Identical sequences G5BYG7
HGL_H00000362125 XP_004872649.1.39548 XP_004872650.1.39548

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