SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|119395754|ref|NP_000415.2| from Homo sapiens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|119395754|ref|NP_000415.2|
Domain Number 1 Region: 399-476
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 3.31e-24
Family Intermediate filament protein, coiled coil region 0.00036
Further Details:      
 
Domain Number 2 Region: 167-201
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.0000000000445
Family Intermediate filament protein, coiled coil region 0.0015
Further Details:      
 
Domain Number 3 Region: 206-277
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.000000012
Family Intermediate filament protein, coiled coil region 0.0059
Further Details:      
 
Weak hits

Sequence:  gi|119395754|ref|NP_000415.2|
Domain Number - Region: 309-400
Classification Level Classification E-value
Superfamily Prefoldin 0.00157
Family Prefoldin 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|119395754|ref|NP_000415.2|
Sequence length 590
Comment keratin, type II cytoskeletal 5 [Homo sapiens]
Sequence
MSRQSSVSFRSGGSRSFSTASAITPSVSRTSFTSVSRSGGGGGGGFGRVSLAGACGVGGY
GSRSLYNLGGSKRISISTSGGSFRNRFGAGAGGGYGFGGGAGSGFGFGGGAGGGFGLGGG
AGFGGGFGGPGFPVCPPGGIQEVTVNQSLLTPLNLQIDPSIQRVRTEEREQIKTLNNKFA
SFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRL
DSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEI
NFMKMFFDAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIANRSRTEAESW
YQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQR
GELALKDARNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECR
LSGEGVGPVNISVVTSSVSSGYGSGSGYGGGLGGGLGGGLGGGLAGGSSGSYYSSSSGGV
GLGGGLSVGGSGFSASSGRGLGVGFGSGGGSSSSVKFVSTTSSSRKSFKS
Download sequence
Identical sequences P13647
gi|119395754|ref|NP_000415.2| 9606.ENSP00000252242 NP_000415.2.87134 NP_000415.2.92137 ENSP00000252242 ENSP00000252242 HR6773 ENSP00000252242

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]