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Domain assignment for gi|197333695|ref|NP_001127949.1| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|197333695|ref|NP_001127949.1|
Domain Number 1 Region: 3-73,205-342
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.36e-50
Family CAF1-like ribonuclease 0.058
Further Details:      
 
Domain Number 2 Region: 109-194
Classification Level Classification E-value
Superfamily R3H domain 7.26e-34
Family R3H domain 0.0000149
Further Details:      
 
Domain Number 3 Region: 370-460
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000108
Family Canonical RBD 0.00000706
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|197333695|ref|NP_001127949.1|
Sequence length 578
Comment poly(A)-specific ribonuclease PARN isoform 2 [Homo sapiens]
Sequence
MDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQGF
DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKFI
DQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVI
SKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFY
CPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKVE
SAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTSA
FVSLSQPEQVKIAVNTSKYAESYRIQTYAEYMGRKQEEKQIKRKWTEDSWKEADSKRLNP
QCIPYTLQNHYYRNNSFTAPSTVGKRNLSPSQEEAGLEDGVSGEISDTELEQTDSCAEPL
SEGRKKAKKLKRMKKELSPAGSISKNSPATLFEVPDTW
Download sequence
Identical sequences ENSP00000345456 NP_001127949.1.87134 NP_001127949.1.92137 gi|197333695|ref|NP_001127949.1| ENSP00000345456

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