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Domain assignment for gi|27436951|ref|NP_116126.2| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|27436951|ref|NP_116126.2|
Domain Number 1 Region: 403-562
Classification Level Classification E-value
Superfamily Lamin A/C globular tail domain 6.93e-47
Family Lamin A/C globular tail domain 0.00000959
Further Details:      
 
Domain Number 2 Region: 301-377
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 1.29e-18
Family Intermediate filament protein, coiled coil region 0.00012
Further Details:      
 
Domain Number 3 Region: 25-58
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.000000022
Family Intermediate filament protein, coiled coil region 0.0018
Further Details:      
 
Weak hits

Sequence:  gi|27436951|ref|NP_116126.2|
Domain Number - Region: 109-209
Classification Level Classification E-value
Superfamily Myosin rod fragments 0.000759
Family Myosin rod fragments 0.0084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|27436951|ref|NP_116126.2|
Sequence length 600
Comment lamin-B2 [Homo sapiens]
Sequence
MATPLPGRAGGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKISE
KEEVTTREVSGIKALYESELADARRVLDETARERARLQIEIGKLRAELDEVNKSAKKREG
ELTVAQGRVKDLESLFHRSEVELAAALSDKRGLESDVAELRAQLAKAEDGHAVAKKQLEK
ETLMRVDLENRCQSLQEELDFRKSVFEEEVRETRRRHERRLVEVDSSRQQEYDFKMAQAL
EELRSQHDEQVRLYKLELEQTYQAKLDSAKLSSDQNDKAASAAREELKEARMRLESLSYQ
LSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDV
KLALDMEINAYRKLLEGEEERLKLSPSPSSRVTVSRATSSSSGSLSATGRLGRSKRKRLE
VEEPLGSGPSVLGTGTGGSGGFHLAQQASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGN
WRIKRQVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHSPPSTLVWKGQSSWGTGESF
RTVLVNADGEEVAMRTVKKSSVMRENENGEEEEEEAEFGEEDLFHQQGDPRTTSRGCYVM
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Identical sequences 9606.ENSP00000327054 ENSP00000462730 gi|27436951|ref|NP_116126.2|

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