SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|296179376|ref|NP_001171671.1| from Homo sapiens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|296179376|ref|NP_001171671.1|
Domain Number 1 Region: 13-114
Classification Level Classification E-value
Superfamily POZ domain 7.85e-22
Family BTB/POZ domain 0.0017
Further Details:      
 
Domain Number 2 Region: 516-568
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000211
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 3 Region: 491-522
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000692
Family Classic zinc finger, C2H2 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|296179376|ref|NP_001171671.1|
Sequence length 672
Comment transcriptional regulator Kaiso [Homo sapiens]
Sequence
MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL
FSVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAELGVPL
SQVKSISGTAQDGNTEPLPPDSGDKNLVIQKSKDEAQDNGATIMPIITESFSLSAEDYEM
KKIIVTDSDDDDDDVIFCSEILPTKETLPSNNTVAQVQSNPGPVAISDVAPSASNNSPPL
TNITPTQKLPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPLSTPPNVSSSLPN
HMPSSINLLVQNQQTPNSAILTGNKANEEEEEEIIDDDDDTISSSPDSAVSNTSLVPQAD
TSQNTSFDGSLIQKMQIPTLLQEPLSNSLKISDIITRNTNDPGVGSKHLMEGQKIITLDT
ATEIEGLSTGCKVYANIGEDTYDIVIPVKDDPDEGEARLENEIPKTSGSEMANKRMKVKH
DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH
EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYL
SDRSSTIPAMKDDGIGYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDG
STEFEFIIPESY
Download sequence
Identical sequences Q86T24
ENSP00000314153 ENSP00000450969 9606.ENSP00000314153 gi|296179376|ref|NP_001171671.1| gi|5803229|ref|NP_006768.1| ENSP00000314153 ENSP00000450969 ENSP00000470483 ENSP00000471279 NP_001171671.1.87134 NP_001171671.1.92137 NP_006768.1.87134 NP_006768.1.92137 ENSP00000314153

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]