SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|300360547|ref|NP_001177934.1| from Homo sapiens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|300360547|ref|NP_001177934.1|
Domain Number 1 Region: 6-97
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.48e-27
Family Canonical RBD 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|300360547|ref|NP_001177934.1|
Sequence length 261
Comment serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
Sequence
MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED
VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNVYSSSRYDDYDRYRRSR
SRSYERRRSRSRSFDYNYRRSYSPRNRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRS
RSKSQPKKEMKAKSRSRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRSKSQSRS
QSRSRSKSRSRSWTSPKSSGH
Download sequence
Identical sequences A0A1U7R2F7 A0A1U7TV93 A0A2J8K3Y9 A0A2J8SJ00 H9H3N2
NP_001177934.1.87134 NP_001177934.1.92137 NP_001182513.1.72884 NP_001271124.1.92730 XP_004425785.1.5094 XP_004678670.1.23501 XP_005004355.1.53824 XP_005079667.1.91757 XP_005317659.1.77405 XP_005353094.1.66349 XP_005394847.1.28644 XP_006196834.1.17985 XP_006239283.1.100692 XP_006975740.1.50099 XP_007121160.1.24612 XP_007175183.1.59432 XP_007459225.1.90284 XP_007978235.1.81039 XP_008060348.1.4292 XP_008571342.1.73410 XP_008961382.1.60992 XP_009231916.1.23681 XP_009448971.1.37143 XP_010343749.1.74449 XP_010354044.1.97406 XP_010593383.1.64505 XP_011355903.1.92234 XP_011761149.1.29376 XP_011833244.1.47321 XP_011935544.1.92194 XP_012359455.1.23891 XP_012387254.1.21590 XP_012506347.1.63892 XP_012606118.1.48125 XP_014986480.1.72884 XP_015306863.1.63531 XP_015341004.1.40921 XP_015982263.1.101085 XP_016070122.1.3490 XP_017390036.1.71028 XP_017527865.1.32401 XP_018868271.1.27298 XP_019568758.1.88060 XP_019794069.1.83887 XP_020011354.1.5219 XP_020949036.1.46622 ENSMUSP00000095455 ENSMMUP00000018123 gi|300360547|ref|NP_001177934.1| ENSP00000344149 ENSP00000344149 9544.ENSMMUP00000018123 ENSMMUP00000018123

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]