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Domain assignment for gi|301500709|ref|NP_001180386.1| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|301500709|ref|NP_001180386.1|
Domain Number 1 Region: 465-533
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.000000000000698
Family Intermediate filament protein, coiled coil region 0.00091
Further Details:      
 
Weak hits

Sequence:  gi|301500709|ref|NP_001180386.1|
Domain Number - Region: 77-107
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.00167
Family Intermediate filament protein, coiled coil region 0.0049
Further Details:      
 
Domain Number - Region: 224-301
Classification Level Classification E-value
Superfamily Sec2 N-terminal region 0.0131
Family Sec2 N-terminal region 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|301500709|ref|NP_001180386.1|
Sequence length 571
Comment intermediate filament family orphan 1 isoform 5 [Homo sapiens]
Sequence
MNPLFGPNLFLLQQEQQGLAGPLGDSLGGDHFAGGGDLPPAPLSPAGPAAYSPPGPGPAP
PAAMALRNDLGSNINVLKTLNLRFRCFLAKVHELERRNRLLEKQLQQALEEGKQGRRGLG
RRDQAVQTGFVSPIRPLGLQLGARPAAVCSPSARVLGSPARSPAGPLAPSAASLSSSSTS
TSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLVQGPGLSWVHPDGVGVQIDTITPEIRA
LYNVLAKVKRERDEYKRRWEEEYTVRIQLQDRVNELQEEAQEADACQEELALKVEQLKAE
LVVFKGLMSNNLSELDTKIQEKAMKVDMDICRRIDITAKLCDVAQQRNCEDMIQMFQKKL
SLHLSPIKVPSMGGRKRERKAAVEEDTSLSESEGPRQPDGDEEESTALSINEEMQRMLNQ
LREYDFEDDCDSLTWEETEETLLLWEDFSGYAMAAAEAQGEQQEDSLEKVIKDTESLFKT
REKEYQETIDQIELELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRRLITQSGDRKSP
AFTAVPLSDPPPPPSEAEDSDRDVSSDSSMR
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Identical sequences A0A087WZ16
ENSP00000482285 NP_001180386.1.87134 NP_001180386.1.92137 XP_003820356.1.60992 gi|301500709|ref|NP_001180386.1|

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