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Domain assignment for gi|302148456|ref|NP_542768.2| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|302148456|ref|NP_542768.2|
Domain Number 1 Region: 456-524
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.00000000000068
Family Intermediate filament protein, coiled coil region 0.00091
Further Details:      
 
Weak hits

Sequence:  gi|302148456|ref|NP_542768.2|
Domain Number - Region: 77-107
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.00162
Family Intermediate filament protein, coiled coil region 0.0049
Further Details:      
 
Domain Number - Region: 224-301
Classification Level Classification E-value
Superfamily Sec2 N-terminal region 0.0131
Family Sec2 N-terminal region 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|302148456|ref|NP_542768.2|
Sequence length 562
Comment intermediate filament family orphan 1 isoform 2 [Homo sapiens]
Sequence
MNPLFGPNLFLLQQEQQGLAGPLGDSLGGDHFAGGGDLPPAPLSPAGPAAYSPPGPGPAP
PAAMALRNDLGSNINVLKTLNLRFRCFLAKVHELERRNRLLEKQLQQALEEGKQGRRGLG
RRDQAVQTGFVSPIRPLGLQLGARPAAVCSPSARVLGSPARSPAGPLAPSAASLSSSSTS
TSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLVQGPGLSWVHPDGVGVQIDTITPEIRA
LYNVLAKVKRERDEYKRRWEEEYTVRIQLQDRVNELQEEAQEADACQEELALKVEQLKAE
LVVFKGLMSNNLSELDTKIQEKAMKVDMDICRRIDITAKLCDVAQQRNCEDMIQMFQKKL
VPSMGGRKRERKAAVEEDTSLSESEGPRQPDGDEEESTALSINEEMQRMLNQLREYDFED
DCDSLTWEETEETLLLWEDFSGYAMAAAEAQGEQEDSLEKVIKDTESLFKTREKEYQETI
DQIELELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRRLITQSGDRKSPAFTAVPLSD
PPPPPSEAEDSDRDVSSDSSMR
Download sequence
Identical sequences ENSP00000337593 NP_542768.2.87134 NP_542768.2.92137 XP_008971973.1.60992 ENSP00000337593 gi|302148456|ref|NP_542768.2|

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