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Domain assignment for gi|52632385|ref|NP_001005335.1| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|52632385|ref|NP_001005335.1|
Domain Number 1 Region: 66-158
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.99e-18
Family Canonical RBD 0.00037
Further Details:      
 
Domain Number 2 Region: 192-321
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.76e-17
Family Canonical RBD 0.0055
Further Details:      
 
Domain Number 3 Region: 1-55
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000557
Family Canonical RBD 0.00079
Further Details:      
 
Domain Number 4 Region: 357-436
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000837
Family Canonical RBD 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|52632385|ref|NP_001005335.1|
Sequence length 456
Comment heterogeneous nuclear ribonucleoprotein L isoform b [Homo sapiens]
Sequence
MPKKRQALVEFEDVLGACNAVNYAADNQIYIAGHPAFVNYSTSQKISRPGDSDDSRSVNS
VLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNGVQAMVEFDSVQSAQRAKASLNG
ADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDH
PAEYGGPHGGYHSHYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPP
EYGPHADSPVLMVYGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVD
RAITHLNNNFMFGQKLNVCVSKQPAIMPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAK
NRIQHPSNVLHFFNAPLEVTEENFFEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKS
DALETLGFLNHYQMKNPNGPYPYTLKLCFSTAQHAS
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Identical sequences A0A2J8QF72 A0A2K5JJG3 A0A2K5YDQ4 A0A2K6S0H6 F6V7W4
gi|52632385|ref|NP_001005335.1| ENSP00000470231 ENSCJAP00000025666 ENSCJAP00000042166 NP_001005335.1.87134 NP_001005335.1.92137 XP_003812309.1.60992 XP_003943172.1.74449 XP_004396465.1.74151 XP_005218970.1.76553 XP_005589195.1.63531 XP_005589196.1.63531 XP_005890602.1.15283 XP_006739448.1.47382 XP_007114632.1.24612 XP_007114633.1.24612 XP_007114634.1.24612 XP_007114635.1.24612 XP_007464738.1.90284 XP_007464739.1.90284 XP_008962909.1.60992 XP_009433643.1.37143 XP_010379244.1.97406 XP_011525191.1.92137 XP_011763164.1.29376 XP_011763165.1.29376 XP_011763166.1.29376 XP_011807789.1.43180 XP_011828726.1.47321 XP_011933858.1.92194 XP_011986613.1.54773 XP_012416462.1.74151 XP_012512543.1.63892 XP_012630147.1.48125 XP_012630148.1.48125 XP_012630149.1.48125 XP_012903073.1.14098 XP_014332106.1.15283 XP_014956052.1.66739 XP_014979284.1.72884 XP_014979286.1.72884 XP_014979287.1.72884 XP_016789546.1.37143 XP_017362052.1.71028 XP_017362055.1.71028 XP_017917854.1.57651 XP_019287664.1.44245 XP_019675133.1.62641 XP_020726003.1.74333 ENSP00000470231

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