SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|7669477|ref|NP_056648.1| from Homo sapiens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|7669477|ref|NP_056648.1|
Domain Number 1 Region: 226-301
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 1.16e-20
Family Double-stranded RNA-binding domain (dsRBD) 0.0000282
Further Details:      
 
Domain Number 2 Region: 74-144
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 3.14e-20
Family Double-stranded RNA-binding domain (dsRBD) 0.000027
Further Details:      
 
Domain Number 3 Region: 412-478
Classification Level Classification E-value
Superfamily Cytokine 0.0000114
Family Interleukin-1 (IL-1) 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|7669477|ref|NP_056648.1|
Sequence length 741
Comment double-stranded RNA-specific editase 1 isoform 2 [Homo sapiens]
Sequence
MDIEDEENMSSSSTDVKENRNLDNVSPKDGSTPGPGEGSQLSNGGGGGPGRKRPLEEGSN
GHSKYRLKKRRKTPGPVLPKNALMQLNEIKPGLQYTLLSQTGPVHAPLFVMSVEVNGQVF
EGSGPTKKKAKLHAAEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSDQADFPDTLFNGF
ETPDKAEPPFYVGSNGDDSFSSSGDLSLSASPVPASLAQPPLPVLPPFPPPSGKNPVMIL
NELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALAAIFNLH
LDQTPSRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTG
TDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDD
QKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEGSRSYTQAGVQWCNH
GSLQPRPPGLLSDPSTSTFQGAGTTEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQ
TWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHGDHLSRAM
YQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDE
LGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFI
KAGLGAWVEKPTEQDQFSLTP
Download sequence
Identical sequences P78563
NP_056648.1.87134 NP_056648.1.92137 XP_016883736.1.92137 XP_016883737.1.92137 XP_016883738.1.92137 XP_016883739.1.92137 XP_016883740.1.92137 ENSP00000387480 ENSP00000353920 ENSP00000414600 ENSP00000435381 gi|7669477|ref|NP_056648.1| 9606.ENSP00000353920 ENSP00000353920 ENSP00000435381 ENSP00000441897

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]