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Domain assignment for gi|82659085|ref|NP_059346.2| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|82659085|ref|NP_059346.2|
Domain Number 1 Region: 197-304
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 2.99e-22
Family Double-stranded RNA-binding domain (dsRBD) 0.00014
Further Details:      
 
Domain Number 2 Region: 99-177
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 1.19e-18
Family Double-stranded RNA-binding domain (dsRBD) 0.00037
Further Details:      
 
Domain Number 3 Region: 23-96
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.0000000000154
Family Double-stranded RNA-binding domain (dsRBD) 0.0061
Further Details:      
 
Weak hits

Sequence:  gi|82659085|ref|NP_059346.2|
Domain Number - Region: 405-474
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.00165
Family Double-stranded RNA-binding domain (dsRBD) 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|82659085|ref|NP_059346.2|
Sequence length 496
Comment double-stranded RNA-binding protein Staufen homolog 1 isoform a [Homo sapiens]
Sequence
MKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGK
GKTRQAAKHDAAAKALRILQNEPLPERLEVNGRESEEENLNKSEISQVFEIALKRNLPVN
FEVARESGPPHMKNFVTKVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLPPLPAVERV
KPRIKKKTKPIVKPQTSPEYGQGINPISRLAQIQQAKKEKEPEYTLLTERGLPRRREFVM
QVKVGNHTAEGTGTNKKVAKRNAAENMLEILGFKVPQAQPTKPALKSEEKTPIKKPGDGR
KVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDFTR
AAPNPAKATVTAMIARELLYGGTSPTAETILKNNISSGHVPHGPLTRPSEQLDYLSRVQG
FQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQST
EMPRTGNGPMSVCGRC
Download sequence
Identical sequences NP_004593.2.87134 NP_004593.2.92137 NP_059346.2.87134 NP_059346.2.92137 NP_059348.2.87134 NP_059348.2.92137 ENSP00000323443 ENSP00000345425 ENSP00000353604 gi|82659083|ref|NP_004593.2| gi|82659085|ref|NP_059346.2| gi|82659089|ref|NP_059348.2| ENSP00000323443 ENSP00000345425 ENSP00000353604

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