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Domain assignment for gi|89213250|ref|NP_001034759.1| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|89213250|ref|NP_001034759.1|
Domain Number 1 Region: 457-525
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.00000000000068
Family Intermediate filament protein, coiled coil region 0.00091
Further Details:      
 
Weak hits

Sequence:  gi|89213250|ref|NP_001034759.1|
Domain Number - Region: 77-107
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.00162
Family Intermediate filament protein, coiled coil region 0.0049
Further Details:      
 
Domain Number - Region: 224-301
Classification Level Classification E-value
Superfamily Sec2 N-terminal region 0.0131
Family Sec2 N-terminal region 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|89213250|ref|NP_001034759.1|
Sequence length 563
Comment intermediate filament family orphan 1 isoform 4 [Homo sapiens]
Sequence
MNPLFGPNLFLLQQEQQGLAGPLGDSLGGDHFAGGGDLPPAPLSPAGPAAYSPPGPGPAP
PAAMALRNDLGSNINVLKTLNLRFRCFLAKVHELERRNRLLEKQLQQALEEGKQGRRGLG
RRDQAVQTGFVSPIRPLGLQLGARPAAVCSPSARVLGSPARSPAGPLAPSAASLSSSSTS
TSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLVQGPGLSWVHPDGVGVQIDTITPEIRA
LYNVLAKVKRERDEYKRRWEEEYTVRIQLQDRVNELQEEAQEADACQEELALKVEQLKAE
LVVFKGLMSNNLSELDTKIQEKAMKVDMDICRRIDITAKLCDVAQQRNCEDMIQMFQKKL
VPSMGGRKRERKAAVEEDTSLSESEGPRQPDGDEEESTALSINEEMQRMLNQLREYDFED
DCDSLTWEETEETLLLWEDFSGYAMAAAEAQGEQQEDSLEKVIKDTESLFKTREKEYQET
IDQIELELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRRLITQSGDRKSPAFTAVPLS
DPPPPPSEAEDSDRDVSSDSSMR
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Identical sequences gi|89213250|ref|NP_001034759.1| ENSP00000349364 ENSP00000390721 ENSP00000349364 NP_001034759.1.87134 NP_001034759.1.92137 XP_003820355.1.60992 9606.ENSP00000349364

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