SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|259490318|ref|NP_001159353.1| from Homo sapiens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|259490318|ref|NP_001159353.1|
Domain Number 1 Region: 396-453
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.68e-25
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 2 Region: 77-137
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 3.27e-25
Family KRAB domain (Kruppel-associated box) 0.001
Further Details:      
 
Domain Number 3 Region: 732-789
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.49e-24
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 4 Region: 676-733
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.6e-24
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 5 Region: 564-621
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.79e-24
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 6 Region: 788-845
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.04e-24
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 7 Region: 844-901
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.66e-23
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 8 Region: 508-565
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.32e-23
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 9 Region: 620-677
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.85e-23
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 10 Region: 452-509
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.14e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 11 Region: 340-397
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.49e-22
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 
Domain Number 12 Region: 284-341
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.93e-22
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 13 Region: 886-938
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.82e-20
Family Classic zinc finger, C2H2 0.0029
Further Details:      
 
Weak hits

Sequence:  gi|259490318|ref|NP_001159353.1|
Domain Number - Region: 236-285
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0436
Family Classic zinc finger, C2H2 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|259490318|ref|NP_001159353.1|
Sequence length 947
Comment zinc finger protein 268 isoform a [Homo sapiens]
Sequence
MATRVRTASIWVPPLQERNSSWDRIRKLQGQESILGQGTPGLQPLPGTPRQKQKSRRIEK
VLEWLFISQEQPKITKSWGPLSFMDVFVDFTWEEWQLLDPAQKCLYRSVMLENYSNLVSL
GYQHTKPDIIFKLEQGEELCMVQAQVPNQTCPNTVWKIDDLMDWHQENKDKLGSTAKSFE
CTTFGKLCLLSTKYLSRQKPHKCGTHGKSLKYIDFTSDYARNNPNGFQVHGKSFFHSKHE
QTVIGIKYCESIESGKTVNKKSQLMCQQMYMGEKPFGCSCCEKAFSSKSYLLVHQQTHAE
EKPYGCNECGKDFSSKSYLIVHQRIHTGEKLHECSECRKTFSFHSQLVIHQRIHTGENPY
ECCECGKVFSRKDQLVSHQKTHSGQKPYVCNECGKAFGLKSQLIIHERIHTGEKPYECNE
CQKAFNTKSNLMVHQRTHTGEKPYVCSDCGKAFTFKSQLIVHQGIHTGVKPYGCIQCGKG
FSLKSQLIVHQRSHTGMKPYVCNECGKAFRSKSYLIIHTRTHTGEKLHECNNCGKAFSFK
SQLIIHQRIHTGENPYECHECGKAFSRKYQLISHQRTHAGEKPYECTDCGKAFGLKSQLI
IHQRTHTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPYSCNECGKAFTFKSQLIVHKG
VHTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPYGCSECGKAFRSKSYLIIHMRTHTG
EKPHECRECGKSFSFNSQLIVHQRIHTGENPYECSECGKAFNRKDQLISHQRTHAGEKPY
GCSECGKAFSSKSYLIIHMRTHSGEKPYECNECGKAFIWKSLLIVHERTHAGVNPYKCSQ
CEKSFSGKLRLLVHQRMHTREKPYECSECGKAFIRNSQLIVHQRTHSGEKPYGCNECGKT
FSQKSILSAHQRTHTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH
Download sequence
Identical sequences Q14587
gi|23308729|ref|NP_003406.1| gi|259490318|ref|NP_001159353.1| 9606.ENSP00000228289 ENSP00000228289 ENSP00000444412 NP_001159353.1.87134 NP_001159353.1.92137 NP_003406.1.87134 NP_003406.1.92137 ENSP00000409295 ENSP00000228289 ENSP00000444412 hso003011774.8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]