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Domain assignment for gi|27544931|ref|NP_666019.1| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|27544931|ref|NP_666019.1|
Domain Number 1 Region: 39-130
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.58e-39
Family SCAN domain 0.0000412
Further Details:      
 
Domain Number 2 Region: 368-425
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.47e-24
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 3 Region: 275-327
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.13e-19
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 4 Region: 313-369
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.39e-18
Family Classic zinc finger, C2H2 0.0087
Further Details:      
 
Domain Number 5 Region: 414-466
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.78e-18
Family Classic zinc finger, C2H2 0.0033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|27544931|ref|NP_666019.1|
Sequence length 473
Comment zinc finger and SCAN domain-containing protein 21 [Homo sapiens]
Sequence
MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP
Download sequence
Identical sequences A1YG26 Q9Y5A6
NP_666019.1.87134 NP_666019.1.92137 XP_005250625.1.92137 XP_006716176.1.92137 XP_008967000.1.60992 XP_008967001.1.60992 XP_008967002.1.60992 XP_016868073.1.92137 ENSP00000292450 gi|27544931|ref|NP_666019.1| 9606.ENSP00000292450 ENSP00000292450 ENSP00000292450

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