SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|16330058|ref|NP_440786.1| from Synechocystis sp. PCC 6803

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|16330058|ref|NP_440786.1|
Domain Number 1 Region: 4-159
Classification Level Classification E-value
Superfamily IpsF-like 7.72e-64
Family IpsF-like 0.00000546
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|16330058|ref|NP_440786.1|
Sequence length 161
Comment 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase [Synechocystis sp. PCC 6803]
Sequence
MTALRIGNGYDIHRLVGDRPLILGGVTIAHHLGLDGHSDADVLTHALMDALLGALSLGDI
GHYFPPSDARWQGADSLKLLAQVHQLILERGWRINNLDNVIVAEQPKLKPHIQAMKENLA
KVLTIDPDLIGIKATTNERLGPTGREEGIAAYSVALLIKEG
Download sequence
Identical sequences L8AIE4 P73426
1148.slr1542 gi|383324970|ref|YP_005385823.1| gi|383490854|ref|YP_005408530.1| gi|16330058|ref|NP_440786.1| gi|16330058|ref|NP_440786.1| WP_010872096.1.11876 WP_010872096.1.1889 WP_010872096.1.18904 WP_010872096.1.33690 WP_010872096.1.35395 WP_010872096.1.47586 WP_010872096.1.99424 gi|383321801|ref|YP_005382654.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]