SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428309838|ref|YP_007120815.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428309838|ref|YP_007120815.1|
Domain Number 1 Region: 463-640
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1.22e-45
Family Histidine kinase 0.00036
Further Details:      
 
Domain Number 2 Region: 159-206,242-370
Classification Level Classification E-value
Superfamily GAF domain-like 2.84e-43
Family GAF domain 0.00069
Further Details:      
 
Domain Number 3 Region: 663-780
Classification Level Classification E-value
Superfamily CheY-like 9.82e-26
Family CheY-related 0.0031
Further Details:      
 
Domain Number 4 Region: 385-475
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 3.14e-20
Family Homodimeric domain of signal transducing histidine kinase 0.00083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428309838|ref|YP_007120815.1|
Sequence length 782
Comment signal transduction histidine kinase [Microcoleus sp. PCC 7113]
Sequence
MFERLQDLLKQMKSRLGEEALLLTDEKSLSKSATPPEFETQRFAVLLSLRFSVLLVGEPQ
EPDSVAGYDGQSRLYQVGLTFEPKAIASFLTQLSRHASHPPIALDTLHQSQTRLRTNDPT
LQTEFTLSLLEILASGEMSDSAHCPVAVCQPLVDEALCQQIEQERLLNQVTTQIRQSLEL
PVILETAVEQLRNFLQVDRLLIYQFDEFNCVSAIYPDNIPSTQDKTESLNLRLTSQGSIL
NSTVYWGRVTYEAKASDAISSVLNLVEKEDCLLQVPNCRTKYRQGLTLSIDDVEAAYPDS
SCILELMRRYQVRAKLVTPIIVQEKLWGLLIANQCFQPRHWLENEKIFLKQIAEHLAVAI
HQAQLYAQLQQQKTTLEQRVIERTQELRDILQAAQAADRAKSEFLATMSHELRTPLTCVI
GMSATLLRWSFGQEGTQQVPLHKQRRYLKTIQESGEHLLELINDILDLSQVEAGKAILNI
SEFSLNNLAHQTIRTFQEKADLRQLKLEMDLQVKSQSMNGTRRQEDRFCADQRRVKQILF
NLLGNAIKFTPSGGKVILRIWREQNWVVFQVEDTGIGIAEEHIPLLFQKFQQLETVYQRN
YEGTGLGLALTKQLVELHGGRIEVESVVGQGSFFTVWLPNQPLTSSTSMREAALQKNNFI
VQGSIVLVEDQEESATSICEILTAAGYHVVWLIDGSTAFQQIELLQPNVVIVDWQLRGMD
GYEVTHCLRNSPSTQQIKILALTTSTITEDQEDELSAFIDDYLLKPVEPLQLLQQVTELM
AK
Download sequence
Identical sequences K9WCB9
gi|428309838|ref|YP_007120815.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]