SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428310359|ref|YP_007121336.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428310359|ref|YP_007121336.1|
Domain Number 1 Region: 538-816
Classification Level Classification E-value
Superfamily Pectin lyase-like 5.61e-34
Family Pectin lyase 0.077
Further Details:      
 
Domain Number 2 Region: 49-294,371-385
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000000000000502
Family Filamentous hemagglutinin FhaB, secretion domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428310359|ref|YP_007121336.1|
Sequence length 1090
Comment filamentous hemagglutinin family domain-containing protein [Microcoleus sp. PCC 7113]
Sequence
MSLSPSKTNLLKARKLLGLLAFFCLLPVPVQAQSITSAPDGTGTIATPNGNQINITGGTL
SPDQTNLFHSFSQFGLSTNEIANFVSNPNIHNILGRVTGGNASVINGLIQVTGGNSNLYL
INPAGMIFGANAQLNVPASFIATTATGIGFGANHWFNATGANNYAELVGEPSQLAFNVSQ
PGSLINAGNLAVNEGQNLTLMGGNVINTGTLTAPGGTITLAAVPGSSLVKISQPGHLLSL
EIDPNQTSNSTNLNPLSLPQLITGEGVTQATGVTVNEQGQVVLTASGAVVPSDGATTIAS
GALNTSGQTGGRVQVLGNKVGFLGANIDASGTNGGGTVLIGGDDQGQGTVPNAQFTFGDS
QTTINADATSQGNGGKVIVWADDTTRFFGKISARGDNGGFVETSGKKGLEVSGATVDAGA
INGQAGTWLLDPSDITISNAATTGGTFPDFNPIGATGNINITDLANALAAGTSVTISTAG
GTGGNGDIFLNNSLTATATNNALLTLTGRYLTPSADSTINITNGNLAINLNAVNPNSTPP
AGTIQNAINAVGTVTGTTTISLGAGTYIEPVTINQPLTLVGAGTGVTTVSGNNAFRVFDI
SASNVTLDGLAIANGNAGDGWGGGIAYSGTGTLNINNSTISDNSAYNGGGILNNYNQSPE
SGTINLTNTTVTGNHGVNAGGGILSWGTINLNGSTVSNNTTGTEGGAGIMSIWGTLNLNN
STVSGNTATNSAYGGGGIFSYNSNLTVTNSTVSGNSTNTTGGGMYVEGGTTTLTNSTIAN
NSAAVSGGGISSNPNAVINLGSTIVAENTAPSSPQVLGNFNDLGSNQIGGTVPAPEPTPT
PTPTPTPTPTPTPTPEPTPTPTPTPEPTPTPTPTPTPEPTPTPTPTPTPEPTPTPEPTPI
PTSTPTPTPTSTPTPTPTPAPTSSSTPTSTPTPTPTPTPAPTSTPTSSSSKNPATNSQAK
LIAPPEEETSPQPQKQPTPVSSLGVLSCTFSNNKEAESLQDILSKIVDYMNTNGGNLSIN
VNDLFANCDMGLQSLSGNQNLVKQTILSLVSQSLGTEYVPLINIHFEPIADPMTAIVEVA
KSRKPASIKP
Download sequence
Identical sequences K9WC13
WP_015182082.1.75295 gi|428310359|ref|YP_007121336.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]