SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428310796|ref|YP_007121773.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428310796|ref|YP_007121773.1|
Domain Number 1 Region: 470-662
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6.02e-34
Family Histidine kinase 0.0037
Further Details:      
 
Domain Number 2 Region: 180-341
Classification Level Classification E-value
Superfamily GAF domain-like 0.0000000000024
Family GAF domain 0.0069
Further Details:      
 
Domain Number 3 Region: 382-422,452-485
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 0.0000353
Family Homodimeric domain of signal transducing histidine kinase 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428310796|ref|YP_007121773.1|
Sequence length 689
Comment histidine kinase with GAF domain [Microcoleus sp. PCC 7113]
Sequence
MAHGYCFLWKPELVWLHAGSDFLIGLAYYSIPLMLLYFVRQRQDVPFQGIFLLFSAFILS
CGTGHLLEILTLWHPVYWLSGLMKAITAIVSLYTASELVPLIPQALALPSPAQLEAANIA
LEKEIVERKEAENALRQAKQELEQRVEERTRELARANQVLQSEIIERELAELALAERERY
LAALAEVQHSLLSLKGDKNYYTSILELLGQSAKASHVYVFENFYDTRGELWSRPCAQWYV
PHLYSEGDSAKCPYLPYETCLPRWTEILARGETIMGLVSEFPEEERFTLEQMGILSLLVL
PLCVNDQFFGFIVFDNCTKAKVWSASAVDLLRAAAAALSLQHERFKAEVALRHSEAQLRE
QATQLEQALNKIKQTQTQLVQSEKMYSLGMMVAGIAHEINNPVGFVYGNITPASESIQDL
LTLVNLYRQHYPNPVPVIQEYEETIDLDFIMDDLPKLLQSMKVGAERIRDIVASLRTFSR
TDQSQMKRVNIHEGLDTTLQILQHRLKKKPGRPAIEVIKKYGRITSVECYSGQINQVFMN
ILANAIDALESMIISSEHIESETMVAHPSPQIQIYTELIDARESISNLPSVVIRIIDNGP
GMTERVRLLLFDPFFTTKPIGQGTGLGLSISYQIIVAKHGGQIRCVSAPGQGTEFIIEIP
IRQCHRKFSPSRQDSSEPQVLPAKNWQLC
Download sequence
Identical sequences K9WFQ9
gi|428310796|ref|YP_007121773.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]