The results are sorted from lowest E-value to highest E-value. Strong classifications have a low E-value. Weak classifications have an E-value greater than 0.0001. Weak hits are shown in gray. Weak hits are not shown on the domain architecture.
The family level classification is conditional on the domain being a member of the specified superfamily. There is a possibility that the selected domain is a member of a sub-family for which no structure has yet been solved.
| Sequence: |
gi|428312871|ref|YP_007123848.1| |
| Domain Number 1 |
Region: 942-1087 |
| Classification Level |
Classification |
E-value |
| Superfamily |
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
7.99e-39 |
| Family |
Histidine kinase |
0.0009 |
| Further Details: |
|
| |
| Domain Number 2 |
Region: 561-733 |
| Classification Level |
Classification |
E-value |
| Superfamily |
GAF domain-like |
1.98e-23 |
| Family |
GAF domain |
0.0067 |
| Further Details: |
|
| |
| Domain Number 3 |
Region: 433-564 |
| Classification Level |
Classification |
E-value |
| Superfamily |
PYP-like sensor domain (PAS domain) |
0.0000000000000105 |
| Family |
PYP-like |
0.034 |
| Further Details: |
|
| |
| Domain Number 4 |
Region: 373-423 |
| Classification Level |
Classification |
E-value |
| Superfamily |
HAMP domain-like |
0.0000000405 |
| Family |
HAMP domain |
0.0058 |
| Further Details: |
|
| |
| Domain Number 5 |
Region: 775-810 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Homodimeric domain of signal transducing histidine kinase |
0.00000186 |
| Family |
Homodimeric domain of signal transducing histidine kinase |
0.0064 |
| Further Details: |
|
| |
| Domain Number 6 |
Region: 168-235 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Sensory domain-like |
0.0000647 |
| Family |
Sensory domain of two-component sensor kinase |
0.064 |
| Further Details: |
|
| |
The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by 
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Information Content (IC) is an information theoretic score measured in bits of how informative it is to assign a given ontological term to a domain archtecture. The higher the score the more informative it is to talk about the term given the domain architecture.
H-score (hypergeometric score) indicates the strength of assigning an ontological term to this domain architecture. Assignments with higher scores are of a better quality. Details for the methodology be found on the dcGO website.
| Molecular Function |
IC (bits) |
H-Score |
| Biological Process |
IC (bits) |
H-Score |
| Cellular Component |
IC (bits) |
H-Score |
