SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428311829|ref|YP_007122806.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428311829|ref|YP_007122806.1|
Domain Number 1 Region: 26-143
Classification Level Classification E-value
Superfamily TPR-like 7.09e-25
Family Tetratricopeptide repeat (TPR) 0.012
Further Details:      
 
Weak hits

Sequence:  gi|428311829|ref|YP_007122806.1|
Domain Number - Region: 5-31
Classification Level Classification E-value
Superfamily ARM repeat 0.00518
Family Clathrin heavy-chain linker domain 0.097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428311829|ref|YP_007122806.1|
Sequence length 156
Comment hypothetical protein Mic7113_3680 [Microcoleus sp. PCC 7113]
Sequence
MNEQLINALLEDLKNPDEDVRNQATEELWRIWFQQKGQYGFERLERSQTLFTAGNVKQAE
ALLTQLIDDLPDFAEAWNRRAVLYYLLGEYQKSQADCLEVLKLNPVHFGALHGLGLCYAA
LGQYRAAIQAFRKALAIQPYALVNQKLILECTARLS
Download sequence
Identical sequences K9WG59
WP_015183541.1.75295 gi|428311829|ref|YP_007122806.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]