SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428314228|ref|YP_007125205.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428314228|ref|YP_007125205.1|
Domain Number 1 Region: 498-799
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.14e-88
Family WD40-repeat 0.0000285
Further Details:      
 
Domain Number 2 Region: 5-325
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.48e-57
Family Protein kinases, catalytic subunit 0.00032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428314228|ref|YP_007125205.1|
Sequence length 800
Comment WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Sequence
MLGITLSGRYTIVKHLGGGGFGQTYLAEDLQLPGNPICVVKQLQPRSTNPLALKIAKRLF
DREAQVLYKLGNHDQIPRLLAHFEQKQEFYLVQEFIEGHDLKQELQLGKRLSETQVIAIC
QELLNILEFVHQQDVIHRDIKPANIIRRKHDGKLVLIDFGAVKEVTNHSVNSEGHSSLTV
AIGSPGYMPNEQLRGKPQFCSDIYAVGMLGIQGLTGVLPSQLPEDPKTLEIIWRDQWHPN
KLPQQVQTNSELADVLDQMVRYDYRQRYQTATDALQAFQGLTNAYSSSTTAAASEYPLPE
AADPFESTVTYPRPAQVPGSPLNSTMEAADPFESTVTYPRPAQVPSSPLNSTIEADEPTQ
APPSQQLPTPDVSATLLETQVSNETTEPLVSQSRKKSSRLMAMGAGIVTALALAVGISHV
QQNNAKTPENGNVEQKVSQVEPAKQKSQGSESQAESANSLAPLEKGLQSASEISPRPPIS
ASPPVLRNTSNAWNNSEKIALANTLMGHSQRVSSIAISSDGQLIASGSEDKTIKVWNLGT
GQLLRTLTGHSEGIRSAAISPDGKWLASGGDDKTIKLWNLDTGKLLRTLTGHSDIVQSVT
ISPDGKLIASGSNDKTVKLWNLETGQEIRTLTGFSYFVVSVAISPDGQTLVSGADKIYLW
HLPTGNLISTISDPSGNVIPSLAMTPDGETLVSGSNWGKFSLWNLRNLLKGCKGVQPCRP
TQIVSGSNGGWVQSLAISPDGKTLATGSDRENTIKLWNASTGEPRITISNRSTSVESLAF
SPDGKTLVTNGEDGKIELWR
Download sequence
Identical sequences K9WPT4
WP_015185928.1.75295 gi|428314228|ref|YP_007125205.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]