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Domain assignment for gi|385805571|ref|YP_005841969.1| from Fervidicoccus fontis Kam940

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|385805571|ref|YP_005841969.1|
Domain Number 1 Region: 51-214,241-375
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.95e-52
Family Tandem AAA-ATPase domain 0.0013
Further Details:      
 
Weak hits

Sequence:  gi|385805571|ref|YP_005841969.1|
Domain Number - Region: 822-854
Classification Level Classification E-value
Superfamily RNA polymerase subunits 0.00628
Family RBP12 subunit of RNA polymerase II 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|385805571|ref|YP_005841969.1|
Sequence length 951
Comment DEAD/DEAH box helicase [Fervidicoccus fontis Kam940]
Sequence
MLFTYKIYNSIFKKEQLKMEKNAFDLLDERLLKVITEYGYREPTSIQNKAIPKILQGRDL
IITAPTGSGKTEAAVFPIFSLMLKDESWNGKPLMVYVTPLRALNRDIFVRLEDISNKIGL
KSIVRHGDSSKRERGDFLRSSYHWFITTPESLSMLITHSATRDMLTDIKFVVIDEVHELI
DSERGNTLEVVLKRLKRIVKKYQFIGISATIPDASIIKKFYSCPFCEVIEDDVKKDIEIK
VRIPGSGTSSKGEDEFSEILKIINEEIERAKSSIIFTNTRDMAEFLTYKLRELGRDDIEI
HHGSLATEVRKSVEKKLKGGEIKGIIATSSLELGIDIGSVDLVIQYGSPRQAIRMLQRVG
RSGHSIVKKARGIIVTTKNLDEIIESVVIARRTLKGELESLIPHEKPFDVLVHQLVGMLL
SAEQRKEEEILKFLNATFSFRNLTEEELKKAIEFCEGIKLIIRKENGELVASRRAREYYY
STTMIPDVQKIPVVTVYGDRIGYLDSDFVLSKLDEGSSFILQGREWSVVSIDDEKLVVEE
VTERMGAPPSWIGEMIPVSRNVAREAISLLSRICRGEVYEKIKSQYQSITIEAYDFVKKV
CEDTRKQGFEFPSQNIALIDWTKTGLLVLTYPLGSNGNETLSLLISNYIFSKTGRSVSTS
SDPYRIYMESTFPLTLNDLIEALYSLSLKEKDEIEEMIKSQLKKSNIFMYKLSTVAKKMG
AISKNATLSEVKKVLKYYKDTLIGEEAFREVFYEKLDIRSVIEMLKDIKSGKVRIVAQPI
EGLSPLVVNSSSAPRPVGYALETLPQELLIKVLEKRILEKTVLLKCMNCGWEKSVKVSEL
PDIISCEKCGARAVAPLPPSNEEFVNAIRKYFKEGKKSLKGKEKEYFEDAVKRAKLVITH
GKTAVMALTPYGVGPKGASRALSMLKLGWNEFLRTLYEEERNYFRTRKYWD
Download sequence
Identical sequences I0A0L0
gi|385805571|ref|YP_005841969.1|

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